Detailed information NTG0676469

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OHA86_RS33460
• Genome accession: NZ_CP109445
• Coordinates: 7848646..7849671 (-)
• Length: 341 a.a.
• NCBI ID: WP_329181398.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01477
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 7843646..7854671

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA86_RS33430 (OHA86_33480)	-	7843669..7845153 (+)	1485	WP_329181389.1	glutamate--cysteine ligase	-
OHA86_RS33435 (OHA86_33485)	-	7845244..7846029 (+)	786	WP_329181391.1	type II CAAX endopeptidase family protein	-
OHA86_RS33440 (OHA86_33490)	-	7846055..7846876 (-)	822	WP_329181393.1	PhzF family phenazine biosynthesis protein	-
OHA86_RS33445 (OHA86_33495)	-	7846994..7847407 (-)	414	WP_329181394.1	VOC family protein	-
OHA86_RS33450 (OHA86_33500)	-	7847413..7847862 (-)	450	WP_329181396.1	helix-turn-helix transcriptional regulator	-
OHA86_RS33455 (OHA86_33505)	-	7847985..7848590 (+)	606	WP_329181397.1	PadR family transcriptional regulator	-
OHA86_RS33460 (OHA86_33510)	cytR	7848646..7849671 (-)	1026	WP_329181398.1	LacI family DNA-binding transcriptional regulator	Regulator
OHA86_RS33465 (OHA86_33515)	-	7849897..7852155 (+)	2259	WP_329181400.1	glycoside hydrolase family 3 N-terminal domain-containing protein	-
OHA86_RS33470 (OHA86_33520)	-	7852331..7853053 (+)	723	WP_329181401.1	pyridoxamine 5'-phosphate oxidase family protein	-
OHA86_RS33475 (OHA86_33525)	-	7853163..7853723 (+)	561	WP_329181402.1	Clp protease N-terminal domain-containing protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 35985.79 Da
• Isoelectric Point: 6.3044

>NTDB_id=676469 OHA86_RS33460 WP_329181398.1 7848646..7849671(-) (cytR) [Streptomyces sp. NBC_01477]
MNIRELARRSGVSTATVSRALNDRAEVSEATRAKIRRLASELGYAPNEPARTLVRRRSDTIGLVWDSGQEAMGQHNPFLL
GLLSAVRTALSEADYHLMLLTTPGAQDQDNAHLQAVQRHNLEGVIVLTTPPDDRCLRVLADSTVPCAGIDTAFTGPRTVR
VSSDNAAGAEAAVQHLYELGHRRIATVTGPLHLPPAAERLAGYLRACARLGLSVPPEYVTEGDFFLASGENAGKRLLALP
DRPTAIFAAGDQMAIGAVHAAADAGLTVPGDLAVVGFDDIDAAALVRPALSTVAQDQRGLGEAAVEALRGLIDATVVDTA
EAQPRIIPTRLLIRGSSRSGV

Nucleotide

• Length: 1026 bp

>NTDB_id=676469 OHA86_RS33460 WP_329181398.1 7848646..7849671(-) (cytR) [Streptomyces sp. NBC_01477]
GTGAACATCCGTGAACTCGCCCGCCGCAGCGGTGTGTCGACCGCCACCGTCTCCCGGGCGCTGAACGACCGGGCCGAGGT
GAGCGAGGCGACCCGCGCCAAGATCCGGCGGCTGGCGAGCGAGTTGGGCTACGCGCCCAACGAGCCCGCCCGCACCCTGG
TGCGGCGCCGCTCGGACACCATCGGGCTGGTGTGGGACAGCGGGCAGGAGGCGATGGGCCAGCACAACCCGTTCCTGCTC
GGACTGCTGAGCGCCGTGCGCACCGCGCTGTCCGAGGCGGACTACCACCTGATGCTGCTGACCACGCCCGGCGCGCAGGA
CCAGGACAACGCCCATCTCCAGGCGGTCCAGCGGCACAACCTGGAGGGGGTGATCGTGCTGACCACCCCGCCGGACGACC
GCTGCCTGCGGGTGCTGGCCGATTCCACGGTGCCCTGCGCGGGGATCGACACCGCCTTCACCGGGCCGCGTACGGTCCGG
GTCAGCTCGGACAACGCGGCGGGCGCGGAGGCCGCCGTGCAGCACCTGTACGAGCTGGGCCACCGCAGGATCGCCACCGT
GACCGGGCCGCTGCACCTGCCGCCGGCCGCCGAGCGCCTGGCGGGCTACCTGCGGGCCTGTGCCCGGCTCGGGCTGAGCG
TGCCGCCGGAGTACGTGACCGAAGGGGACTTCTTCCTGGCCAGCGGGGAGAACGCGGGCAAGCGGCTGCTCGCGCTGCCC
GACCGGCCCACCGCGATCTTCGCCGCGGGCGACCAGATGGCGATCGGCGCGGTGCACGCGGCGGCCGACGCCGGGCTGAC
GGTGCCGGGCGACCTGGCGGTGGTCGGCTTCGACGACATCGACGCCGCGGCGCTGGTACGGCCGGCGCTGAGCACGGTCG
CGCAGGACCAGCGCGGCCTGGGGGAAGCGGCGGTGGAGGCGCTGCGGGGCCTGATCGACGCGACGGTGGTGGACACCGCC
GAGGCGCAGCCGCGGATCATCCCCACCCGGCTGCTGATACGCGGATCGAGCCGGTCCGGGGTGTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (173-337)

• Bacterial regulatory proteins, lacI family (LacI) (3-47)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	36.286	100	0.372