Detailed information NTG0676143

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG352_RS14900
• Genome accession: NZ_CP109435
• Coordinates: 3250322..3251611 (-)
• Length: 429 a.a.
• NCBI ID: WP_329217356.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01485
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3245322..3256611

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG352_RS14890 (OG352_14900)	-	3246410..3249034 (-)	2625	WP_329217352.1	valine--tRNA ligase	-
OG352_RS14895 (OG352_14905)	-	3249171..3250193 (+)	1023	WP_329217354.1	hypothetical protein	-
OG352_RS14900 (OG352_14910)	clpX	3250322..3251611 (-)	1290	WP_329217356.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG352_RS14905 (OG352_14915)	clpP	3251794..3252474 (-)	681	WP_329217358.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG352_RS14910 (OG352_14920)	clpP	3252795..3253400 (-)	606	WP_266409263.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG352_RS14915 (OG352_14925)	tig	3253816..3255207 (-)	1392	WP_329217360.1	trigger factor	-
OG352_RS14930 (OG352_14940)	-	3255943..3256137 (-)	195	WP_329217362.1	hypothetical protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46908.76 Da
• Isoelectric Point: 4.7788

>NTDB_id=676143 OG352_RS14900 WP_329217356.1 3250322..3251611(-) (clpX) [Streptomyces sp. NBC_01485]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIETRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=676143 OG352_RS14900 WP_329217356.1 3250322..3251611(-) (clpX) [Streptomyces sp. NBC_01485]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCCCTGTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCCCAGA
CCCTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCCACGGCGCTGACCGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGCGAAAACCCCTCCATCACCCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGACCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTGCAGATCCTGATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGACAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTCGTCCTCTCCAACGTCAATCCGACCCTGATCCCGCGCGACGCGCGCGGCGGCCGCGGCCCGGGCGAGCAGAA
GACGGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	95.804	0.52