Detailed information NTG0676101

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG310_RS23830
• Genome accession: NZ_CP109427
• Coordinates: 5659455..5660747 (+)
• Length: 430 a.a.
• NCBI ID: WP_329457905.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01497
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5654455..5665747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG310_RS23815 (OG310_23820)	tig	5655579..5656997 (+)	1419	WP_329457903.1	trigger factor	-
OG310_RS23820 (OG310_23825)	-	5657916..5658521 (+)	606	WP_329460340.1	ATP-dependent Clp protease proteolytic subunit	-
OG310_RS23825 (OG310_23830)	clpP	5658569..5659243 (+)	675	WP_329457904.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG310_RS23830 (OG310_23835)	clpX	5659455..5660747 (+)	1293	WP_329457905.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG310_RS23835 (OG310_23840)	-	5660940..5662028 (-)	1089	WP_329457906.1	hypothetical protein	-
OG310_RS23840 (OG310_23845)	-	5662166..5664787 (+)	2622	WP_329457907.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47316.18 Da
• Isoelectric Point: 5.1114

>NTDB_id=676101 OG310_RS23830 WP_329457905.1 5659455..5660747(+) (clpX) [Streptomyces sp. NBC_01497]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGSGSGREDAIELGKSNILLLGPTGSGKTHLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIVYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGSKGIGFGATIRSKRELEERDMFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALKRILVEPRHALVKQYQRLFELDGAELEFEPSALEAIADQAILRGTGARGLRAILEEVLMSVMYEVPSRKDVARVVIT
EEVVHSHVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=676101 OG310_RS23830 WP_329457905.1 5659455..5660747(+) (clpX) [Streptomyces sp. NBC_01497]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGGCCCGGGGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAGGAGCTCGCGGAGACCT
CCGAGGTGCGCTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTTGAGGGCTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTGTCGGTGGCGGTCTACAACCACTACAAGCGGGTGCAGGCCGGCGAGAACGGCAGCGGTTCCGGCCG
TGAGGACGCCATCGAGCTCGGCAAGTCCAACATCCTGCTGCTCGGTCCGACCGGCTCCGGCAAGACCCACCTCGCGCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGCATCGTCTACATCGA
CGAGATCGACAAGGTCGCGCGTAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGTGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCAGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGGCTGGAGCGGATCATCGAGTCGCGGGCGGGGTC
CAAGGGCATCGGTTTCGGTGCGACGATCCGCTCGAAGCGCGAGCTTGAGGAACGCGACATGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCTCCGTGCACAACCTGGACCGC
GAGGCGCTCAAGCGCATCCTGGTCGAGCCGCGCCACGCACTGGTCAAGCAGTACCAGCGGCTGTTCGAACTGGACGGCGC
GGAGCTGGAGTTCGAGCCCTCCGCGCTCGAAGCCATCGCGGACCAGGCGATCCTGCGCGGTACGGGCGCGCGCGGCCTGC
GGGCCATCCTCGAAGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GAAGAGGTCGTCCACTCGCACGTGAACCCGACGCTGGTACCGCGCGAGCCGCGGATCGTGAAGAACGACGGACGGCACGA
GAAGTCCGCGTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.75	93.023	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512