Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA12_RS07010 | Genome accession | NZ_CP095104 |
| Coordinates | 1380900..1381874 (-) | Length | 324 a.a. |
| NCBI ID | WP_002481040.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain IVB6179 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1375900..1386874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA12_RS06980 (MUA12_06940) | gcvT | 1376390..1377484 (-) | 1095 | WP_262576874.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MUA12_RS06985 (MUA12_06945) | - | 1377663..1378202 (-) | 540 | WP_002481034.1 | shikimate kinase | - |
| MUA12_RS06990 (MUA12_06950) | comGF | 1378367..1378861 (-) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| MUA12_RS06995 (MUA12_06955) | comGD | 1379080..1379505 (-) | 426 | WP_002481037.1 | competence type IV pilus minor pilin ComGD | - |
| MUA12_RS07000 (MUA12_06960) | comGC | 1379508..1379837 (-) | 330 | WP_107548333.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA12_RS07005 (MUA12_06965) | comGB | 1379855..1380928 (-) | 1074 | WP_262576876.1 | competence type IV pilus assembly protein ComGB | - |
| MUA12_RS07010 (MUA12_06970) | comGA | 1380900..1381874 (-) | 975 | WP_002481040.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA12_RS07015 (MUA12_06975) | - | 1381931..1382554 (-) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| MUA12_RS07020 (MUA12_06980) | - | 1382554..1382883 (-) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| MUA12_RS07025 (MUA12_06985) | - | 1382883..1383869 (-) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| MUA12_RS07030 (MUA12_06990) | - | 1383869..1384069 (-) | 201 | WP_002481044.1 | YqgQ family protein | - |
| MUA12_RS07035 (MUA12_06995) | - | 1384053..1385510 (-) | 1458 | WP_262576877.1 | rhomboid family intramembrane serine protease | - |
| MUA12_RS07040 (MUA12_07000) | - | 1385523..1386065 (-) | 543 | WP_107548395.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36968.00 Da Isoelectric Point: 7.7580
>NTDB_id=675462 MUA12_RS07010 WP_002481040.1 1380900..1381874(-) (comGA) [Staphylococcus simulans strain IVB6179]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=675462 MUA12_RS07010 WP_002481040.1 1380900..1381874(-) (comGA) [Staphylococcus simulans strain IVB6179]
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGTGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGTGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.991 |
99.691 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.991 |
99.691 |
0.608 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
38.245 |
98.457 |
0.377 |