Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA56_RS06465 | Genome accession | NZ_CP095102 |
| Coordinates | 1385427..1386401 (+) | Length | 324 a.a. |
| NCBI ID | WP_002481040.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain IVB6188 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1380427..1391401
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA56_RS06435 (MUA56_06430) | - | 1381236..1381778 (+) | 543 | WP_002481046.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA56_RS06440 (MUA56_06435) | - | 1381791..1383248 (+) | 1458 | WP_103364379.1 | rhomboid family intramembrane serine protease | - |
| MUA56_RS06445 (MUA56_06440) | - | 1383232..1383432 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| MUA56_RS06450 (MUA56_06445) | - | 1383432..1384418 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| MUA56_RS06455 (MUA56_06450) | - | 1384418..1384747 (+) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| MUA56_RS06460 (MUA56_06455) | - | 1384747..1385370 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| MUA56_RS06465 (MUA56_06460) | comGA | 1385427..1386401 (+) | 975 | WP_002481040.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA56_RS06470 (MUA56_06465) | comGB | 1386373..1387446 (+) | 1074 | WP_262550310.1 | competence type IV pilus assembly protein ComGB | - |
| MUA56_RS06475 (MUA56_06470) | comGC | 1387464..1387799 (+) | 336 | WP_262550312.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA56_RS06480 (MUA56_06475) | comGD | 1387796..1388221 (+) | 426 | WP_002481037.1 | competence type IV pilus minor pilin ComGD | - |
| MUA56_RS06485 (MUA56_06480) | comGF | 1388440..1388934 (+) | 495 | WP_262550314.1 | competence type IV pilus minor pilin ComGF | - |
| MUA56_RS06490 (MUA56_06485) | - | 1389099..1389638 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| MUA56_RS06495 (MUA56_06490) | gcvT | 1389817..1390911 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36968.00 Da Isoelectric Point: 7.7580
>NTDB_id=675435 MUA56_RS06465 WP_002481040.1 1385427..1386401(+) (comGA) [Staphylococcus simulans strain IVB6188]
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=675435 MUA56_RS06465 WP_002481040.1 1385427..1386401(+) (comGA) [Staphylococcus simulans strain IVB6188]
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACTTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACTTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.991 |
99.691 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.991 |
99.691 |
0.608 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
38.245 |
98.457 |
0.377 |