Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   MUA90_RS05240 Genome accession   NZ_CP095096
Coordinates   1119858..1120487 (+) Length   209 a.a.
NCBI ID   WP_105994268.1    Uniprot ID   -
Organism   Staphylococcus sp. IVB6181     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1114858..1125487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA90_RS05210 (MUA90_05210) - 1115020..1115544 (-) 525 WP_262587362.1 transposase -
  MUA90_RS05215 (MUA90_05215) - 1115618..1116604 (-) 987 WP_262588596.1 aromatic acid exporter family protein -
  MUA90_RS05220 (MUA90_05220) map 1116825..1117589 (+) 765 WP_232167989.1 type I methionyl aminopeptidase -
  MUA90_RS05225 (MUA90_05225) - 1117716..1118111 (+) 396 WP_114603035.1 hypothetical protein -
  MUA90_RS05230 (MUA90_05230) liaF 1118127..1118828 (+) 702 WP_262588597.1 cell wall-active antibiotics response protein LiaF -
  MUA90_RS05235 (MUA90_05235) vraS 1118825..1119868 (+) 1044 WP_114603037.1 sensor histidine kinase Regulator
  MUA90_RS05240 (MUA90_05240) vraR 1119858..1120487 (+) 630 WP_105994268.1 response regulator transcription factor Regulator
  MUA90_RS05245 (MUA90_05245) - 1120573..1121151 (-) 579 WP_114603038.1 carbonic anhydrase -
  MUA90_RS05250 (MUA90_05250) - 1121357..1122436 (-) 1080 WP_262588598.1 YihY/virulence factor BrkB family protein -
  MUA90_RS05255 (MUA90_05255) - 1122556..1122846 (-) 291 WP_114603040.1 YtxH domain-containing protein -
  MUA90_RS05260 (MUA90_05260) - 1122854..1123318 (-) 465 WP_105994272.1 low molecular weight protein-tyrosine-phosphatase -
  MUA90_RS05265 (MUA90_05265) - 1123553..1123759 (+) 207 WP_105994273.1 DUF1128 family protein -
  MUA90_RS05270 (MUA90_05270) - 1123796..1125034 (+) 1239 WP_262588599.1 aminopeptidase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23670.29 Da        Isoelectric Point: 4.6997

>NTDB_id=675374 MUA90_RS05240 WP_105994268.1 1119858..1120487(+) (vraR) [Staphylococcus sp. IVB6181]
MAIKVLFVDDHEMVRIGISSYLSTQPDIEVVGEGKSGKEAIEKAHELKPDLILMDLLMDDMDGVEATMQIKKDLPQIKVL
MLTSYIEDNEVYRALDAGVDSYILKTTSASDIAEAIRKTQRNEAVFEAEVLVKMRNRMNQRAELYELLTDREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHDLIQ

Nucleotide


Download         Length: 630 bp        

>NTDB_id=675374 MUA90_RS05240 WP_105994268.1 1119858..1120487(+) (vraR) [Staphylococcus sp. IVB6181]
ATGGCGATTAAAGTATTATTTGTCGATGACCATGAAATGGTCAGAATCGGCATTTCAAGTTATTTATCTACGCAACCTGA
CATTGAGGTCGTCGGTGAAGGCAAATCCGGGAAAGAAGCAATTGAAAAGGCGCATGAATTAAAGCCTGATTTGATTTTAA
TGGATTTATTAATGGATGATATGGACGGCGTAGAAGCAACAATGCAAATCAAGAAAGACTTGCCGCAAATCAAAGTGCTG
ATGCTGACAAGTTATATTGAAGATAACGAAGTCTACCGTGCATTGGATGCAGGGGTGGACAGTTATATTTTAAAAACAAC
AAGTGCCAGCGACATTGCAGAAGCAATCAGAAAAACACAGCGCAATGAAGCTGTCTTTGAAGCAGAAGTACTGGTTAAAA
TGCGTAATCGTATGAATCAGCGTGCAGAATTATATGAGCTGTTAACAGATAGAGAAATGGAAATCTTATTACTTATCGCT
AAAGGTTATTCAAACCAAGAAATCGCAAGTGCCTCCCATATTACAATTAAAACGGTTAAGACACATGTAAGTAATATTTT
AAGCAAGCTGGAAGTGCAAGACAGAACACAAGCTGTGATTTATGCTTTCCAACATGACTTAATTCAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

90.431

100

0.904
  degU Bacillus subtilis subsp. subtilis str. 168

34.375

100

0.368