Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA90_RS05235 Genome accession   NZ_CP095096
Coordinates   1118825..1119868 (+) Length   347 a.a.
NCBI ID   WP_114603037.1    Uniprot ID   -
Organism   Staphylococcus sp. IVB6181     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1113825..1124868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA90_RS05205 (MUA90_05205) - 1114148..1115053 (-) 906 WP_316959807.1 IS3 family transposase -
  MUA90_RS05210 (MUA90_05210) - 1115020..1115544 (-) 525 WP_262587362.1 transposase -
  MUA90_RS05215 (MUA90_05215) - 1115618..1116604 (-) 987 WP_262588596.1 aromatic acid exporter family protein -
  MUA90_RS05220 (MUA90_05220) map 1116825..1117589 (+) 765 WP_232167989.1 type I methionyl aminopeptidase -
  MUA90_RS05225 (MUA90_05225) - 1117716..1118111 (+) 396 WP_114603035.1 hypothetical protein -
  MUA90_RS05230 (MUA90_05230) liaF 1118127..1118828 (+) 702 WP_262588597.1 cell wall-active antibiotics response protein LiaF -
  MUA90_RS05235 (MUA90_05235) vraS 1118825..1119868 (+) 1044 WP_114603037.1 sensor histidine kinase Regulator
  MUA90_RS05240 (MUA90_05240) vraR 1119858..1120487 (+) 630 WP_105994268.1 response regulator transcription factor Regulator
  MUA90_RS05245 (MUA90_05245) - 1120573..1121151 (-) 579 WP_114603038.1 carbonic anhydrase -
  MUA90_RS05250 (MUA90_05250) - 1121357..1122436 (-) 1080 WP_262588598.1 YihY/virulence factor BrkB family protein -
  MUA90_RS05255 (MUA90_05255) - 1122556..1122846 (-) 291 WP_114603040.1 YtxH domain-containing protein -
  MUA90_RS05260 (MUA90_05260) - 1122854..1123318 (-) 465 WP_105994272.1 low molecular weight protein-tyrosine-phosphatase -
  MUA90_RS05265 (MUA90_05265) - 1123553..1123759 (+) 207 WP_105994273.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39924.21 Da        Isoelectric Point: 4.8331

>NTDB_id=675373 MUA90_RS05235 WP_114603037.1 1118825..1119868(+) (vraS) [Staphylococcus sp. IVB6181]
MNHYIRAIGSMLILIYSILAIFFFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNILVILMSIIVGSVLAYKVNEQNDWIKE
QIEHSIEGEVVGINDQNIELYQETLDIYHTLVPLNQELHRLRIKTQDLTNETYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESPLEPPLDQQIPTLEKMVQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFEVPKGIEDHLFRITQEGISNTLRHAEGTKLTIDLFNKDDYLLLRIQDDGKGFDVDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEENDGD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=675373 MUA90_RS05235 WP_114603037.1 1118825..1119868(+) (vraS) [Staphylococcus sp. IVB6181]
ATGAACCACTATATCAGAGCGATCGGCTCGATGCTGATACTGATTTACAGTATTTTAGCGATATTCTTTTTTATCGATAA
AGTATTTGTTAATATTATTTACTTTCAAGGTATGTTTTATACGCAGATCTTCGGCATTCCGGTGTTCTTATTCTTAAATA
TCTTAGTGATATTAATGAGTATCATCGTAGGGTCTGTACTTGCGTATAAAGTGAATGAACAAAATGATTGGATCAAAGAA
CAAATCGAGCATTCGATTGAAGGGGAAGTCGTAGGAATCAACGATCAAAATATCGAGTTGTACCAAGAGACACTGGATAT
TTATCATACGCTTGTACCCTTGAATCAAGAATTGCATCGTTTACGTATTAAAACTCAAGATTTAACAAATGAAACGTATA
ATCTTAATGATGTAAAGGTAAAGAAAATTATTGAAGACGAAAGACAACGCCTCGCCAGAGAGCTGCACGACTCTGTCAGC
CAGCAATTGTTTGCGGCGAGTATGATGTTGTCCGCAATTAAGGAATCACCCCTAGAACCGCCTTTAGACCAGCAAATCCC
GACACTTGAAAAGATGGTCCAAGACTCGCAATTAGAAATGCGTGCTTTATTATTGCATCTGAGACCGTTAGGGTTAAAAG
ATCGTTCGCTCGGCGAAGGTATCAAAGACCTTGTTGTAGACTTGCAGAAGAAAGTGCCTATGAAAGTGGTCTATGACATC
GAAGACTTTGAAGTTCCAAAAGGAATTGAAGATCATTTATTCAGAATTACACAAGAAGGTATTTCTAATACCTTGCGTCA
TGCTGAAGGTACTAAGCTGACAATTGATTTATTTAATAAAGATGATTATCTGTTATTGCGTATTCAAGATGATGGCAAAG
GCTTTGACGTAGATGAAAAAATGGAAAAAAGCTACGGCTTAAAGAATATGCGAGAACGTGCGTTAGAAATCGGGGCAACA
CTGCATATTGTTTCATTGCCTGGTGCAGGGACAAGAATAGAAGTGAAGGCTCCATTGAATAAGGAGGAAAATGATGGCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

85.591

100

0.856