Detailed information NTG0674013

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG846_RS10390
• Genome accession: NZ_CP109314
• Coordinates: 2244381..2245667 (-)
• Length: 428 a.a.
• NCBI ID: WP_217465538.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01601
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2239381..2250667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG846_RS10380 (OG846_10390)	-	2240489..2243113 (-)	2625	WP_329011159.1	valine--tRNA ligase	-
OG846_RS10385 (OG846_10395)	-	2243251..2244318 (+)	1068	WP_329011160.1	hypothetical protein	-
OG846_RS10390 (OG846_10400)	clpX	2244381..2245667 (-)	1287	WP_217465538.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG846_RS10395 (OG846_10405)	clpP	2245838..2246503 (-)	666	WP_161145967.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG846_RS10400 (OG846_10410)	clpP	2246574..2247179 (-)	606	WP_202494535.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG846_RS10405 (OG846_10415)	tig	2247435..2248808 (-)	1374	WP_329011161.1	trigger factor	-
OG846_RS10420 (OG846_10430)	-	2249402..2249596 (-)	195	WP_161145964.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46886.78 Da
• Isoelectric Point: 4.8852

>NTDB_id=674013 OG846_RS10390 WP_217465538.1 2244381..2245667(-) (clpX) [Streptomyces sp. NBC_01601]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELAAKDIFEDIMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDSRGRGQGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=674013 OG846_RS10390 WP_217465538.1 2244381..2245667(-) (clpX) [Streptomyces sp. NBC_01601]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTGTGCAACGAGATCATCGAGGAAGAGCTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGAGCTACGTGGTCGGCCAGGAAGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCCAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCGCAGA
CCCTGGCCCGCATGCTCAACGTCCCCTTCGCCATCGCGGACGCCACCGCGCTCACCGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGCGAGCTGGCCGCCAAGGACATCTTCGAGGACATCATGCCCG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTGCACAACCTCGACCGC
GAGGCCCTGCTCAAGATCCTCGTCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTGCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCCGACGTCGTCCACTCCAACGTCAACCCGACCCTGATCCCGAGGGACTCCCGCGGCCGGGGCCAGGGCGAGCAGAAGAC
CGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523