Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   BTUAT1_RS11175 Genome accession   NZ_AP014928
Coordinates   2213321..2213614 (-) Length   97 a.a.
NCBI ID   WP_008342186.1    Uniprot ID   A0A5K1NAM4
Organism   Bacillus altitudinis strain TUAT1     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2208321..2218614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTUAT1_RS11125 (BTUAT1_22040) sinR 2208485..2208820 (+) 336 WP_017357978.1 transcriptional regulator SinR Regulator
  BTUAT1_RS11130 (BTUAT1_22050) tasA 2208888..2209688 (-) 801 WP_008342195.1 biofilm matrix protein TasA -
  BTUAT1_RS11135 (BTUAT1_22060) sipW 2209747..2210319 (-) 573 WP_041091749.1 signal peptidase I SipW -
  BTUAT1_RS11140 (BTUAT1_22070) tapA 2210369..2210896 (-) 528 WP_041091748.1 amyloid fiber anchoring/assembly protein TapA -
  BTUAT1_RS11145 (BTUAT1_22080) - 2211149..2211475 (+) 327 WP_007501224.1 DUF3889 domain-containing protein -
  BTUAT1_RS11150 (BTUAT1_22090) - 2211510..2211704 (-) 195 WP_008342191.1 YqzE family protein -
  BTUAT1_RS11155 (BTUAT1_22100) - 2211765..2212148 (-) 384 WP_060832429.1 competence type IV pilus minor pilin ComGG -
  BTUAT1_RS11160 (BTUAT1_22110) comGF 2212145..2212642 (-) 498 WP_017367592.1 competence type IV pilus minor pilin ComGF -
  BTUAT1_RS11165 (BTUAT1_22120) comGE 2212584..2212898 (-) 315 WP_017367593.1 competence type IV pilus minor pilin ComGE -
  BTUAT1_RS11170 (BTUAT1_22130) comGD 2212882..2213328 (-) 447 WP_060832430.1 competence type IV pilus minor pilin ComGD -
  BTUAT1_RS11175 (BTUAT1_22140) comGC 2213321..2213614 (-) 294 WP_008342186.1 competence type IV pilus major pilin ComGC Machinery gene
  BTUAT1_RS11180 (BTUAT1_22150) comGB 2213631..2214671 (-) 1041 WP_017367595.1 competence type IV pilus assembly protein ComGB -
  BTUAT1_RS11185 (BTUAT1_22160) comGA 2214652..2215722 (-) 1071 WP_017357987.1 competence type IV pilus ATPase ComGA Machinery gene
  BTUAT1_RS11190 (BTUAT1_22170) - 2216180..2217049 (-) 870 WP_007501231.1 STAS domain-containing protein -
  BTUAT1_RS11200 (BTUAT1_22180) - 2217275..2217655 (-) 381 WP_007501232.1 Spx/MgsR family RNA polymerase-binding regulatory protein -
  BTUAT1_RS11205 (BTUAT1_22190) - 2217868..2218110 (+) 243 WP_003217440.1 DUF2626 domain-containing protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10728.62 Da        Isoelectric Point: 6.7081

>NTDB_id=67391 BTUAT1_RS11175 WP_008342186.1 2213321..2213614(-) (comGC) [Bacillus altitudinis strain TUAT1]
MNDKGFTLLEMLIVMLVISILLLITIPNITRHHQSIQAKGCEGLKSMVSTQVMAYELEHDGKTPSLAELEKEGYVKKGLT
CPNGKAIFIQNGDVKNE

Nucleotide


Download         Length: 294 bp        

>NTDB_id=67391 BTUAT1_RS11175 WP_008342186.1 2213321..2213614(-) (comGC) [Bacillus altitudinis strain TUAT1]
ATGAATGATAAAGGATTTACACTGTTAGAAATGTTAATTGTCATGCTTGTGATCTCCATTCTTTTATTGATCACCATTCC
AAATATCACTCGGCATCATCAAAGCATTCAAGCAAAGGGCTGTGAAGGGCTGAAATCAATGGTGAGTACACAGGTAATGG
CATATGAATTAGAGCATGACGGCAAGACGCCATCTTTAGCTGAATTAGAAAAAGAAGGCTATGTCAAAAAAGGATTAACT
TGTCCGAATGGAAAGGCAATTTTCATTCAAAACGGGGATGTGAAAAATGAATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAM4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

67.01

100

0.67
  comGC Staphylococcus aureus MW2

41.304

94.845

0.392
  comGC Staphylococcus aureus N315

41.304

94.845

0.392

Multiple sequence alignment