Detailed information NTG0673655

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH767_RS32360
• Genome accession: NZ_CP109302
• Coordinates: 7113092..7114378 (+)
• Length: 428 a.a.
• NCBI ID: WP_406202816.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01614
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7108092..7119378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH767_RS32330 (OH767_32215)	-	7108699..7109043 (+)	345	WP_406416156.1	hypothetical protein	-
OH767_RS32345 (OH767_32230)	tig	7109868..7111262 (+)	1395	WP_406416158.1	trigger factor	-
OH767_RS32350 (OH767_32235)	clpP	7111540..7112160 (+)	621	WP_406416160.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH767_RS32355 (OH767_32240)	clpP	7112231..7112911 (+)	681	WP_406202814.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH767_RS32360 (OH767_32245)	clpX	7113092..7114378 (+)	1287	WP_406202816.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH767_RS32365 (OH767_32250)	-	7114456..7115439 (-)	984	WP_406416163.1	hypothetical protein	-
OH767_RS32370 (OH767_32255)	-	7115576..7118200 (+)	2625	WP_406202820.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46877.68 Da
• Isoelectric Point: 4.7847

>NTDB_id=673655 OH767_RS32360 WP_406202816.1 7113092..7114378(+) (clpX) [Streptomyces sp. NBC_01614]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=673655 OH767_RS32360 WP_406202816.1 7113092..7114378(+) (clpX) [Streptomyces sp. NBC_01614]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTATATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GTGAGGTCCGCTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAAGCA
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCGGACGCGACCGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAATCCGTCGATCACCCGGGACGTCAGCGGTGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTCGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGTGAGCTGGAGGCGAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTTCGCTCGAACGTGAACCCGACGCTGATCCCCCGGGACGCGCGGGGGCGGGGGTCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523