Detailed information NTG0673442

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG784_RS14470
• Genome accession: NZ_CP109298
• Coordinates: 3153253..3154551 (-)
• Length: 432 a.a.
• NCBI ID: WP_030970081.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01617
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3148253..3159551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG784_RS14460 (OG784_14475)	-	3149415..3152036 (-)	2622	WP_313937266.1	valine--tRNA ligase	-
OG784_RS14465 (OG784_14480)	-	3152175..3153188 (+)	1014	WP_313937267.1	hypothetical protein	-
OG784_RS14470 (OG784_14485)	clpX	3153253..3154551 (-)	1299	WP_030970081.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG784_RS14475 (OG784_14490)	clpP	3154709..3155392 (-)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG784_RS14480 (OG784_14495)	-	3155440..3156045 (-)	606	WP_018551584.1	ATP-dependent Clp protease proteolytic subunit	-
OG784_RS14485 (OG784_14500)	tig	3156310..3157698 (-)	1389	WP_313937268.1	trigger factor	-
OG784_RS14500 (OG784_14515)	-	3158234..3158428 (-)	195	WP_030921275.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47284.11 Da
• Isoelectric Point: 4.8824

>NTDB_id=673442 OG784_RS14470 WP_030970081.1 3153253..3154551(-) (clpX) [Streptomyces sp. NBC_01617]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENAGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=673442 OG784_RS14470 WP_030970081.1 3153253..3154551(-) (clpX) [Streptomyces sp. NBC_01617]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGCCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGTGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATTCCCGAGTTCATCGGCCGCCTCCCCGTGCTTACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTCC
GGGCCATCATGGAGGAAGTCCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGTAACAACGTCAACCCGACACTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509