Detailed information NTG0673371

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OH735_RS11995
• Genome accession: NZ_CP109297
• Coordinates: 2545459..2546757 (-)
• Length: 432 a.a.
• NCBI ID: WP_406381365.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01618
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2540459..2551757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH735_RS11985 (OH735_11960)	-	2541616..2544237 (-)	2622	WP_406381361.1	valine--tRNA ligase	-
OH735_RS11990 (OH735_11965)	-	2544378..2545376 (+)	999	WP_406381363.1	hypothetical protein	-
OH735_RS11995 (OH735_11970)	clpX	2545459..2546757 (-)	1299	WP_406381365.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OH735_RS12000 (OH735_11975)	clpP	2546915..2547595 (-)	681	WP_383756184.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OH735_RS12005 (OH735_11980)	-	2547677..2548285 (-)	609	WP_406386533.1	ATP-dependent Clp protease proteolytic subunit	-
OH735_RS12010 (OH735_11985)	tig	2548550..2549965 (-)	1416	WP_406381368.1	trigger factor	-
OH735_RS12025 (OH735_12000)	-	2550585..2550779 (-)	195	WP_389990756.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47201.02 Da
• Isoelectric Point: 4.8824

>NTDB_id=673371 OH735_RS11995 WP_406381365.1 2545459..2546757(-) (clpX) [Streptomyces sp. NBC_01618]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENAGAQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=673371 OH735_RS11995 WP_406381365.1 2545459..2546757(-) (clpX) [Streptomyces sp. NBC_01618]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGCCGGCGCCCAGGGCCG
GGACGACGGCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTTCTCGCGCAGA
CCCTGGCCCGTATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAGCGCCTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509