Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   MUA71_RS05035 Genome accession   NZ_CP094806
Coordinates   1037263..1037979 (-) Length   238 a.a.
NCBI ID   WP_204172643.1    Uniprot ID   -
Organism   Staphylococcus arlettae strain IVB6234     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1032263..1042979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA71_RS05015 (MUA71_04985) - 1033106..1033330 (+) 225 WP_002509111.1 sulfurtransferase TusA family protein -
  MUA71_RS05020 (MUA71_04990) - 1033709..1034668 (+) 960 WP_262615845.1 LacI family DNA-binding transcriptional regulator -
  MUA71_RS05025 (MUA71_04995) - 1034751..1036235 (+) 1485 WP_238126166.1 sucrose-6-phosphate hydrolase -
  MUA71_RS05030 (MUA71_05000) - 1036232..1037194 (+) 963 WP_112369522.1 carbohydrate kinase -
  MUA71_RS05035 (MUA71_05005) agrA 1037263..1037979 (-) 717 WP_204172643.1 quorum-sensing response regulator AgrA Regulator
  MUA71_RS05040 (MUA71_05010) agrC 1037992..1039290 (-) 1299 WP_002509116.1 quorum-sensing sensor histidine kinase AgrC -
  MUA71_RS05045 (MUA71_05015) agrD 1039318..1039455 (-) 138 WP_002509117.1 cyclic lactone autoinducer peptide AgrD -
  MUA71_RS05050 (MUA71_05020) - 1039452..1040027 (-) 576 WP_002509118.1 accessory gene regulator AgrB -
  MUA71_RS05055 (MUA71_05025) - 1040770..1041555 (-) 786 WP_002509119.1 carbon-nitrogen family hydrolase -
  MUA71_RS05060 (MUA71_05030) - 1041812..1042441 (-) 630 WP_204171835.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27769.55 Da        Isoelectric Point: 4.8504

>NTDB_id=672940 MUA71_RS05035 WP_204172643.1 1037263..1037979(-) (agrA) [Staphylococcus arlettae strain IVB6234]
MKIFICEDDVRQRDSMVSIIDNYIMIEEKPMEIALATGDPYAILEEAKNQQGVGCYFLDIQLDADINGIKLASEIRKHDP
VGNIIFVTSHSELTYLTFVYKIAAMDFIFKDDPEELKSRIIDCIETSETRLNLLSKDSSVETIELKRGSNSVYVRYDDIM
FFESSSKSHRLIAHLDNRQIEFYGNLKELSQLDERFFRCHNSFVVNRHNIESIDSKERIVYFNNQEYCYASVRNIKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=672940 MUA71_RS05035 WP_204172643.1 1037263..1037979(-) (agrA) [Staphylococcus arlettae strain IVB6234]
TTGAAAATTTTCATATGCGAAGATGATGTGAGGCAGCGAGACAGTATGGTGTCTATTATTGATAACTATATTATGATTGA
AGAAAAGCCAATGGAAATTGCATTGGCCACTGGAGATCCTTACGCAATTTTAGAGGAAGCCAAAAATCAGCAGGGCGTTG
GTTGTTACTTTTTAGATATCCAACTCGATGCAGATATCAATGGCATTAAATTAGCAAGTGAGATTCGAAAACATGACCCA
GTGGGCAACATCATTTTTGTTACAAGCCATAGTGAACTTACATATTTAACATTTGTTTATAAAATAGCTGCAATGGATTT
TATCTTTAAAGATGATCCTGAGGAATTAAAATCTCGCATTATCGATTGTATAGAAACGTCTGAAACACGCTTAAATCTTT
TATCGAAAGACAGTAGCGTTGAAACTATAGAACTTAAACGCGGTAGTAATTCTGTATATGTACGTTACGATGATATTATG
TTTTTTGAATCTTCATCAAAATCACACCGTTTAATTGCGCATTTAGACAATCGACAAATTGAATTTTATGGTAACTTAAA
AGAACTCAGTCAATTAGATGAGCGGTTTTTCAGGTGTCACAATAGCTTTGTGGTTAATCGACATAATATTGAATCCATTG
ATTCTAAAGAACGGATAGTTTATTTCAATAATCAAGAATATTGCTATGCATCAGTTCGAAATATAAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

85.714

100

0.857