Detailed information NTG0672322

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIE77_RS27550
• Genome accession: NZ_CP109182
• Coordinates: 6479063..6480349 (+)
• Length: 428 a.a.
• NCBI ID: WP_148013969.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01715
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6474063..6485349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIE77_RS27520 (OIE77_27520)	-	6474346..6474540 (+)	195	WP_054231893.1	hypothetical protein	-
OIE77_RS27535 (OIE77_27535)	tig	6475570..6476955 (+)	1386	WP_148013971.1	trigger factor	-
OIE77_RS27540 (OIE77_27540)	clpP	6477489..6478094 (+)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE77_RS27545 (OIE77_27545)	clpP	6478222..6478902 (+)	681	WP_148013970.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIE77_RS27550 (OIE77_27550)	clpX	6479063..6480349 (+)	1287	WP_148013969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIE77_RS27555 (OIE77_27555)	-	6480428..6481411 (-)	984	WP_329322679.1	hypothetical protein	-
OIE77_RS27560 (OIE77_27560)	-	6481547..6484177 (+)	2631	WP_329322680.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46812.59 Da
• Isoelectric Point: 4.7331

>NTDB_id=672322 OIE77_RS27550 WP_148013969.1 6479063..6480349(+) (clpX) [Streptomyces sp. NBC_01715]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEEKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
AALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=672322 OIE77_RS27550 WP_148013969.1 6479063..6480349(+) (clpX) [Streptomyces sp. NBC_01715]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCGGGTGAGAACGGCGGCGGCCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTGCTCGCGCAGA
CGCTCGCCCGTATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGTGTCCAGCAGGCAC
TGCTGAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGCGCGGGTGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGGAGAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAATTCATCGGCCGCCTCCCGGTCATCACGTCGGTCCACAACCTCGACCGC
GCGGCGCTCCTCCAGATCCTCGTCGAACCGCGCAACGCGCTCGTCAAGCAGTACCAGCGTCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCCGACGTGGTCCTGTCGAACGTCAACCCCACCCTCATCCCGCGGGACGCCCGCGGCCGGGGCTCCGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521