Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   MUA94_RS05890 Genome accession   NZ_CP094768
Coordinates   1172205..1174415 (+) Length   736 a.a.
NCBI ID   WP_262538654.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6202     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1167205..1179415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA94_RS05850 (MUA94_05840) aroE 1167602..1168408 (+) 807 WP_115305449.1 shikimate dehydrogenase -
  MUA94_RS05855 (MUA94_05845) yhbY 1168412..1168702 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA94_RS05860 (MUA94_05850) nadD 1168705..1169274 (+) 570 WP_000725161.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA94_RS05865 (MUA94_05855) yqeK 1169264..1169848 (+) 585 WP_001019325.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA94_RS05870 (MUA94_05860) rsfS 1169849..1170202 (+) 354 WP_001088020.1 ribosome silencing factor -
  MUA94_RS05875 (MUA94_05865) - 1170205..1170921 (+) 717 WP_115305447.1 class I SAM-dependent methyltransferase -
  MUA94_RS05880 (MUA94_05870) comEA 1170961..1171647 (+) 687 WP_262538652.1 ComEA family DNA-binding protein Machinery gene
  MUA94_RS05885 (MUA94_05875) - 1171739..1172200 (+) 462 WP_000439693.1 ComE operon protein 2 -
  MUA94_RS05890 (MUA94_05880) comEC 1172205..1174415 (+) 2211 WP_262538654.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA94_RS05895 (MUA94_05885) holA 1174472..1175446 (+) 975 WP_262538656.1 DNA polymerase III subunit delta -
  MUA94_RS05900 (MUA94_05890) rpsT 1175491..1175742 (-) 252 WP_001274017.1 30S ribosomal protein S20 -
  MUA94_RS05905 (MUA94_05895) lepA 1176088..1177911 (+) 1824 WP_000368338.1 translation elongation factor 4 -

Sequence

Protein


Download         Length: 736 a.a.        Molecular weight: 85212.32 Da        Isoelectric Point: 10.0152

>NTDB_id=672166 MUA94_RS05890 WP_262538654.1 1172205..1174415(+) (comEC) [Staphylococcus aureus strain IVB6202]
MLYVALSMIVGVLWNSSKVLSTFLFILLLYIAYRKNKIVYAPISLFLIIFSSWYLHYSQQATFNYINYIERNSQFNERAQ
VIQIQRQGSDTYKGRLSLKNEIYPFFLTNKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLESNRSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNLPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIHLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQIQWVGFLSNLIFVPYYSFILFPLSILFFITSHFIVGLTPLNYLVDLSFNFH
DWLLDLFTRIKQSHFSVPKFNDWIFIIFIIFIISVYYIFWLLAKRKYILVTFWTIIILTLLITFPTNSHHKITMLNVGQG
DSILYEGGKNQNVLIDTGGKVIDDTKQPSYSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIY
NKGYSSNTLMLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKKVLLMGDASKNNES
LLLKKYNLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQNGQVTIDLD
DNLKVDSNSYGNASGL

Nucleotide


Download         Length: 2211 bp        

>NTDB_id=672166 MUA94_RS05890 WP_262538654.1 1172205..1174415(+) (comEC) [Staphylococcus aureus strain IVB6202]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTATATTGCTTATCGTAAAAATAAAATCGTTTATGCCCCTATTTCTCTCTTTTTAATCATTTTCTCCTCATGGT
ATTTACATTATTCACAACAAGCAACATTTAATTATATCAATTATATTGAACGTAATTCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGGTAGTGACACATATAAAGGTAGGTTGAGTTTAAAAAATGAAATATATCCTTTCTTTTT
AACAAATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ATAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGCCTAGAATCGAACCGGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCGGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTTAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTACCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTATTTGCTCAATATACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACTCTTGT
ACTGCTTATTACTAAGCAAATTAAAATAAAGGGTATTCATCTATTAGCATTTGCATTTATAATTATGTTTATTTTAAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACGTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCAAACTT
TCATCAAATTCAATGGGTGGGATTTTTATCTAATTTGATTTTTGTACCGTACTATTCGTTTATATTGTTTCCGCTATCTA
TTTTATTCTTTATTACAAGTCATTTTATTGTGGGATTAACGCCGCTAAATTACTTGGTTGACCTAAGTTTTAATTTTCAT
GACTGGTTACTAGACCTATTCACAAGAATCAAGCAATCACATTTTTCTGTTCCCAAGTTTAATGATTGGATATTTATAAT
ATTTATAATATTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATATATTGGTTACGTTTTGGA
CTATAATTATTCTGACATTATTAATAACGTTTCCAACAAATTCACATCACAAAATTACAATGTTAAATGTGGGGCAGGGA
GACAGTATTTTATATGAAGGTGGTAAGAACCAAAATGTCTTGATTGATACAGGTGGGAAAGTGATTGATGATACTAAACA
ACCTAGTTATTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATCTAATTT
TAACACATCCACACAATGACCATATTGGTGAAGTGGAATATATTATTAGTCATATTAAAATTAAACATATAGTGATATAC
AATAAGGGATATAGTAGTAATACATTGATGTTATTATCGAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAG
ACAAGTTAGTAGTTTTAAACTTGGAGATAGTAGTTTTCTATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATG
AATATTCGATTATTACTATGATTACATATCAAAATAAAAAAGTTTTATTAATGGGCGATGCTAGTAAAAATAATGAATCT
TTACTACTAAAAAAATATAACTTGCCGGAGATTGATATTTTAAAAGTAGGACATCATGGGAGCAAGACAAGTAGTTCTAA
AGAATTTATAGAGATGATTAAGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTTCCTAACATAG
AAGTTGTTAAACGATTGCAAGGGATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTCAAGTTACAATTGACTTAGAT
GATAATTTAAAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterProScan.

Competence protein (Competence)

(183-438)

Metallo-beta-lactamase superfamily (Lactamase_B)

(477-682)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Staphylococcus aureus N315

98.234

100

0.982
  comEC Staphylococcus aureus MW2

98.098

100

0.981