Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   MUA94_RS05880 Genome accession   NZ_CP094768
Coordinates   1170961..1171647 (+) Length   228 a.a.
NCBI ID   WP_262538652.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6202     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1165961..1176647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA94_RS05845 (MUA94_05835) yqeH 1166488..1167588 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  MUA94_RS05850 (MUA94_05840) aroE 1167602..1168408 (+) 807 WP_115305449.1 shikimate dehydrogenase -
  MUA94_RS05855 (MUA94_05845) yhbY 1168412..1168702 (+) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  MUA94_RS05860 (MUA94_05850) nadD 1168705..1169274 (+) 570 WP_000725161.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  MUA94_RS05865 (MUA94_05855) yqeK 1169264..1169848 (+) 585 WP_001019325.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  MUA94_RS05870 (MUA94_05860) rsfS 1169849..1170202 (+) 354 WP_001088020.1 ribosome silencing factor -
  MUA94_RS05875 (MUA94_05865) - 1170205..1170921 (+) 717 WP_115305447.1 class I SAM-dependent methyltransferase -
  MUA94_RS05880 (MUA94_05870) comEA 1170961..1171647 (+) 687 WP_262538652.1 ComEA family DNA-binding protein Machinery gene
  MUA94_RS05885 (MUA94_05875) - 1171739..1172200 (+) 462 WP_000439693.1 ComE operon protein 2 -
  MUA94_RS05890 (MUA94_05880) comEC 1172205..1174415 (+) 2211 WP_262538654.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MUA94_RS05895 (MUA94_05885) holA 1174472..1175446 (+) 975 WP_262538656.1 DNA polymerase III subunit delta -
  MUA94_RS05900 (MUA94_05890) rpsT 1175491..1175742 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.55 Da        Isoelectric Point: 9.7859

>NTDB_id=672164 MUA94_RS05880 WP_262538652.1 1170961..1171647(+) (comEA) [Staphylococcus aureus strain IVB6202]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLSDQKMIFIPHKGQKNVEPQIGVKSVHVKN
GNINNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=672164 MUA94_RS05880 WP_262538652.1 1170961..1171647(+) (comEA) [Staphylococcus aureus strain IVB6202]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTATCAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAAAAGTGTGCACGTAAAAAAT
GGAAACATAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

97.357

99.561

0.969
  comEA Staphylococcus aureus N315

97.357

99.561

0.969