Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   MUA20_RS04105 Genome accession   NZ_CP094742
Coordinates   831695..832324 (+) Length   209 a.a.
NCBI ID   WP_037575783.1    Uniprot ID   A0AAE5SZX5
Organism   Staphylococcus chromogenes strain IVB6199     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 826695..837324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA20_RS04080 (MUA20_04050) - 827367..828377 (-) 1011 WP_262621794.1 aromatic acid exporter family protein -
  MUA20_RS04085 (MUA20_04055) map 828708..829466 (+) 759 WP_262621796.1 type I methionyl aminopeptidase -
  MUA20_RS04090 (MUA20_04060) - 829562..829951 (+) 390 WP_262621797.1 hypothetical protein -
  MUA20_RS04095 (MUA20_04065) liaF 829964..830665 (+) 702 WP_262621798.1 cell wall-active antibiotics response protein LiaF -
  MUA20_RS04100 (MUA20_04070) vraS 830662..831705 (+) 1044 WP_262621799.1 sensor histidine kinase Regulator
  MUA20_RS04105 (MUA20_04075) vraR 831695..832324 (+) 630 WP_037575783.1 response regulator transcription factor Regulator
  MUA20_RS04110 (MUA20_04080) - 832528..833100 (-) 573 WP_262621800.1 carbonic anhydrase -
  MUA20_RS04115 (MUA20_04085) - 833143..834411 (-) 1269 WP_262621801.1 YihY/virulence factor BrkB family protein -
  MUA20_RS04120 (MUA20_04090) - 834537..834812 (-) 276 WP_262621802.1 YtxH domain-containing protein -
  MUA20_RS04125 (MUA20_04095) - 834817..835275 (-) 459 WP_262621803.1 low molecular weight protein-tyrosine-phosphatase -
  MUA20_RS04130 (MUA20_04100) - 835408..835617 (+) 210 WP_262621804.1 DUF1128 domain-containing protein -
  MUA20_RS04135 (MUA20_04105) - 835648..836877 (+) 1230 WP_262621805.1 aminopeptidase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23432.11 Da        Isoelectric Point: 5.1755

>NTDB_id=671752 MUA20_RS04105 WP_037575783.1 831695..832324(+) (vraR) [Staphylococcus chromogenes strain IVB6199]
MTIKVLFVDDHEMVRIGISSYLSTQPDIEVVGEGASGKEAIEKAHALKPDLILMDLVMTDMDGVEATTQIKKDLPKIKVV
MLTSYIEDKEVYRALDAGVDSYILKTTSASDIAEAIRKTSKGESVFEAEVLVKMRNRMRQRAELYELLTEREMEILLLIS
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHGLIE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=671752 MUA20_RS04105 WP_037575783.1 831695..832324(+) (vraR) [Staphylococcus chromogenes strain IVB6199]
ATGACAATTAAAGTTTTATTTGTAGATGACCACGAAATGGTAAGAATTGGTATCTCAAGTTATTTATCTACGCAGCCAGA
TATTGAAGTTGTTGGGGAAGGGGCTTCGGGTAAAGAAGCCATCGAAAAAGCGCATGCATTAAAACCTGATTTAATTTTAA
TGGATTTAGTGATGACGGATATGGACGGAGTAGAAGCGACGACGCAAATTAAGAAAGATTTACCTAAAATCAAAGTCGTG
ATGCTTACAAGTTATATTGAGGATAAAGAAGTCTACCGTGCATTAGATGCAGGTGTAGACAGTTATATTTTAAAAACAAC
AAGCGCCAGTGACATTGCCGAAGCCATTCGCAAAACATCTAAAGGGGAATCTGTCTTTGAAGCAGAAGTACTCGTTAAAA
TGAGAAATCGTATGCGCCAACGTGCAGAACTTTACGAGCTTTTAACCGAAAGAGAAATGGAAATTTTATTATTGATTTCA
AAAGGCTATTCTAATCAAGAAATTGCGAGCGCTTCACATATAACGATTAAAACCGTTAAAACACATGTTAGTAACATTTT
AAGTAAACTTGAAGTTCAAGACCGTACACAAGCTGTGATATATGCTTTCCAACATGGGCTCATAGAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

90.909

100

0.909
  degU Bacillus subtilis subsp. subtilis str. 168

35.714

100

0.383