Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   MUA20_RS04100 Genome accession   NZ_CP094742
Coordinates   830662..831705 (+) Length   347 a.a.
NCBI ID   WP_262621799.1    Uniprot ID   -
Organism   Staphylococcus chromogenes strain IVB6199     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 825662..836705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA20_RS04075 (MUA20_04045) - 826601..827329 (+) 729 WP_145400673.1 type 1 glutamine amidotransferase -
  MUA20_RS04080 (MUA20_04050) - 827367..828377 (-) 1011 WP_262621794.1 aromatic acid exporter family protein -
  MUA20_RS04085 (MUA20_04055) map 828708..829466 (+) 759 WP_262621796.1 type I methionyl aminopeptidase -
  MUA20_RS04090 (MUA20_04060) - 829562..829951 (+) 390 WP_262621797.1 hypothetical protein -
  MUA20_RS04095 (MUA20_04065) liaF 829964..830665 (+) 702 WP_262621798.1 cell wall-active antibiotics response protein LiaF -
  MUA20_RS04100 (MUA20_04070) vraS 830662..831705 (+) 1044 WP_262621799.1 sensor histidine kinase Regulator
  MUA20_RS04105 (MUA20_04075) vraR 831695..832324 (+) 630 WP_037575783.1 response regulator transcription factor Regulator
  MUA20_RS04110 (MUA20_04080) - 832528..833100 (-) 573 WP_262621800.1 carbonic anhydrase -
  MUA20_RS04115 (MUA20_04085) - 833143..834411 (-) 1269 WP_262621801.1 YihY/virulence factor BrkB family protein -
  MUA20_RS04120 (MUA20_04090) - 834537..834812 (-) 276 WP_262621802.1 YtxH domain-containing protein -
  MUA20_RS04125 (MUA20_04095) - 834817..835275 (-) 459 WP_262621803.1 low molecular weight protein-tyrosine-phosphatase -
  MUA20_RS04130 (MUA20_04100) - 835408..835617 (+) 210 WP_262621804.1 DUF1128 domain-containing protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39837.71 Da        Isoelectric Point: 4.9367

>NTDB_id=671751 MUA20_RS04100 WP_262621799.1 830662..831705(+) (vraS) [Staphylococcus chromogenes strain IVB6199]
MNQYVRSIGSMLILVYSLFTAFFFIDNVFTNIIFFQGMFYTQIFGVPVFLFLNLIAIFLCIIVGSVLAYKNNQQNDWLKA
QIERSIEGETVGVNDKQIELYHETLELYEALVPLNQELHRMRIKTQNLTNESYNMNDSKVQKIIEDERHRLARELHDSVS
QQLFAASMMLSAIKETPLESPLSQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDRSLGEGIQSLVSDLQRKVPLNVVQDI
GEFDVPKGMEDHLFRITQEAISNTLRHSKGTEVTVELLQRDDYILLRIQDDGIGFNVDDKMEQSYGLKNMRERAMEIGAT
FHIVSLPDSGTRIEVKAPLDKEGHNDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=671751 MUA20_RS04100 WP_262621799.1 830662..831705(+) (vraS) [Staphylococcus chromogenes strain IVB6199]
ATGAATCAATATGTACGATCCATCGGTTCAATGCTGATTTTAGTGTATAGTCTCTTTACCGCTTTTTTCTTTATTGATAA
TGTCTTCACAAATATCATCTTTTTTCAAGGAATGTTTTACACACAAATTTTTGGAGTTCCTGTTTTCTTGTTTCTAAATT
TAATAGCCATTTTTTTATGTATAATCGTTGGGAGTGTGCTCGCTTATAAAAATAACCAACAAAATGATTGGTTGAAAGCG
CAAATTGAACGCTCAATTGAAGGTGAGACGGTAGGCGTAAATGACAAACAAATTGAACTTTATCATGAAACATTAGAATT
ATATGAAGCACTTGTGCCGCTTAATCAAGAACTTCACCGTATGCGCATTAAAACACAAAATTTAACGAACGAATCGTATA
ACATGAATGATTCAAAAGTTCAGAAAATCATTGAAGATGAGCGGCACCGGTTAGCGCGTGAATTGCATGATAGTGTCTCT
CAACAGCTATTTGCGGCAAGTATGATGTTATCAGCAATAAAAGAAACACCACTTGAGTCTCCACTGAGCCAACAAATACC
CACTTTAGAGAAAATGGTACAGGATTCGCAATTAGAAATGCGCGCATTACTTTTGCATCTGAGACCGATTGGCTTAAAAG
ATCGTTCTTTAGGTGAAGGGATACAGTCTTTGGTATCAGATTTACAACGTAAAGTGCCATTAAATGTAGTTCAAGATATT
GGGGAATTTGACGTTCCCAAAGGGATGGAAGATCACCTTTTCAGAATTACACAAGAGGCAATTTCAAATACCCTACGTCA
TTCTAAAGGCACAGAGGTGACTGTTGAATTACTTCAGCGTGACGATTACATACTCCTACGTATACAAGATGACGGTATAG
GGTTTAACGTTGATGATAAGATGGAACAAAGTTATGGTTTGAAAAATATGCGTGAACGTGCGATGGAAATCGGTGCGACG
TTCCATATCGTATCGTTACCAGATTCAGGTACACGTATTGAAGTGAAAGCACCGTTAGATAAGGAGGGGCATAATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

80.692

100

0.807