Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   MUA33_RS04595 Genome accession   NZ_CP094736
Coordinates   966727..967356 (+) Length   209 a.a.
NCBI ID   WP_262631191.1    Uniprot ID   -
Organism   Staphylococcus delphini strain IVB6222     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 961727..972356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA33_RS04570 (MUA33_04560) - 962640..963638 (-) 999 WP_262611975.1 aromatic acid exporter family protein -
  MUA33_RS04575 (MUA33_04565) map 963735..964496 (+) 762 WP_019166460.1 type I methionyl aminopeptidase -
  MUA33_RS04580 (MUA33_04570) - 964594..964983 (+) 390 WP_262631190.1 hypothetical protein -
  MUA33_RS04585 (MUA33_04575) liaF 964996..965697 (+) 702 WP_096597675.1 cell wall-active antibiotics response protein LiaF -
  MUA33_RS04590 (MUA33_04580) vraS 965694..966737 (+) 1044 WP_019166463.1 sensor histidine kinase Regulator
  MUA33_RS04595 (MUA33_04585) vraR 966727..967356 (+) 630 WP_262631191.1 response regulator transcription factor Regulator
  MUA33_RS04600 (MUA33_04590) - 967990..968571 (-) 582 WP_096597677.1 carbonic anhydrase -
  MUA33_RS04605 (MUA33_04595) - 968604..969950 (-) 1347 WP_262631193.1 YihY/virulence factor BrkB family protein -
  MUA33_RS04610 (MUA33_04600) - 970166..970453 (-) 288 WP_014613485.1 YtxH domain-containing protein -
  MUA33_RS04615 (MUA33_04605) - 970461..970919 (-) 459 WP_262611980.1 low molecular weight protein-tyrosine-phosphatase -
  MUA33_RS04620 (MUA33_04610) - 971053..971256 (+) 204 WP_019169369.1 DUF1128 family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23426.13 Da        Isoelectric Point: 5.3718

>NTDB_id=671591 MUA33_RS04595 WP_262631191.1 966727..967356(+) (vraR) [Staphylococcus delphini strain IVB6222]
MTIKVLFVDDHEMVRIGISSYLSTQPDIEVVGEGASGKEAIAKAHELKPDLILMDLVMTDMDGVEATMQIKKDLPHIKVV
MLTSYIEDKEVYRALDAGVDSYILKTTSANGIAEAVRKTSRGESVFEAEVLVKMRNRMKQRAELYELLTEREMEILLLIS
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHGLIE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=671591 MUA33_RS04595 WP_262631191.1 966727..967356(+) (vraR) [Staphylococcus delphini strain IVB6222]
ATGACAATTAAAGTATTATTTGTTGATGATCATGAAATGGTACGTATAGGGATTTCAAGTTATTTATCAACACAACCCGA
TATCGAAGTGGTGGGGGAAGGCGCCTCAGGTAAGGAAGCGATCGCAAAAGCCCACGAACTGAAACCGGATTTGATTTTAA
TGGATTTAGTGATGACGGATATGGACGGCGTGGAAGCGACAATGCAAATTAAGAAAGATCTGCCACATATTAAAGTCGTA
ATGCTGACAAGTTATATTGAAGATAAAGAAGTGTATCGTGCATTAGATGCCGGTGTCGATAGTTATATTTTAAAAACGAC
AAGTGCTAATGGTATTGCGGAAGCGGTACGTAAAACGAGTCGTGGTGAGTCTGTATTTGAAGCGGAAGTATTAGTGAAAA
TGCGCAATCGAATGAAGCAACGTGCGGAGTTATATGAGTTGTTGACTGAGCGCGAGATGGAAATTTTGTTATTGATTTCA
AAAGGCTATTCGAACCAAGAAATTGCGAGTGCGTCACATATTACCATTAAGACGGTAAAGACGCATGTGAGTAATATTTT
AAGTAAACTTGAAGTGCAAGACCGTACGCAAGCAGTCATTTATGCTTTCCAACACGGCTTGATTGAGTAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

92.344

100

0.923
  degU Bacillus subtilis subsp. subtilis str. 168

35.714

100

0.383