Detailed information NTG0067147

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KF707C_RS17265
• Genome accession: NZ_AP014862
• Coordinates: 3704488..3706719 (-)
• Length: 743 a.a.
• NCBI ID: WP_003456206.1
• Uniprot ID: A0AAD1C1M3
• Organism: Metapseudomonas furukawaii strain KF707
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3699488..3711719

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KF707C_RS17225 (KF707C_34110)	-	3699524..3699805 (+)	282	WP_003456197.1	pyrimidine/purine nucleoside phosphorylase	-
KF707C_RS17230 (KF707C_34120)	murB	3699869..3700888 (-)	1020	WP_003456198.1	UDP-N-acetylmuramate dehydrogenase	-
KF707C_RS17235 (KF707C_34130)	-	3700885..3701349 (-)	465	WP_003456200.1	low molecular weight protein-tyrosine-phosphatase	-
KF707C_RS17240 (KF707C_34140)	kdsB	3701349..3702113 (-)	765	WP_003456201.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KF707C_RS17245 (KF707C_34150)	-	3702110..3702295 (-)	186	WP_003456202.1	Trm112 family protein	-
KF707C_RS17250 (KF707C_34160)	lpxK	3702333..3703337 (-)	1005	WP_003456203.1	tetraacyldisaccharide 4'-kinase	-
KF707C_RS17255 (KF707C_34170)	-	3703337..3703783 (-)	447	WP_003456204.1	biopolymer transporter ExbD	-
KF707C_RS17260 (KF707C_34180)	-	3703780..3704415 (-)	636	WP_003456205.1	MotA/TolQ/ExbB proton channel family protein	-
KF707C_RS17265 (KF707C_34190)	comA	3704488..3706719 (-)	2232	WP_003456206.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KF707C_RS17270 (KF707C_34200)	-	3706886..3707413 (+)	528	WP_003456208.1	DUF2062 domain-containing protein	-
KF707C_RS17275 (KF707C_34210)	-	3707460..3708704 (-)	1245	WP_003456209.1	lipoprotein-releasing ABC transporter permease subunit	-
KF707C_RS17280 (KF707C_34220)	lolD	3708706..3709389 (-)	684	WP_003456210.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
KF707C_RS17285 (KF707C_34230)	-	3709382..3710632 (-)	1251	WP_003456211.1	lipoprotein-releasing ABC transporter permease subunit	-
KF707C_RS17290 (KF707C_34240)	-	3710801..3711385 (+)	585	WP_036993972.1	PilZ domain-containing protein	-
KF707C_RS17295 (KF707C_34250)	-	3711395..3711685 (+)	291	WP_003456213.1	hypothetical protein	-

Sequence

Protein

• Length: 743 a.a.
• Molecular weight: 79918.03 Da
• Isoelectric Point: 10.5278

>NTDB_id=67147 KF707C_RS17265 WP_003456206.1 3704488..3706719(-) (comA) [Metapseudomonas furukawaii strain KF707]
MPVSWGLLALASGMLALRWMPALPAAGTLLLQALLGLILLRGRLWPLGLFLLGLAWACIGARIALDDRLDPALDGEIRWL
EGQVAGLPAVAEGVTRFELEDVRSPRAELPTRLRLSWHGAPMVRAGERWRLAVKLKRPHGLVNPGTFDHEAWLLARRIGA
TGAVKAGERLRVAAGPSAWRDGLRLRLLAEDAGGRAGGLAALVLGDGSGLSVADWRLLQDTGTTHLMVISGQHISLFAGV
LYGLVALLARLGLWPGRLPWLPWACGLAFAGGLGYGLLAGFDVPVQRACLMLAVVLVWRLRFRHLGLFVPLLGALCTVLL
AEPLVVLQPGFWLSFGSVALLVLAFAGRLGAWRWWVTWWRAQWVMGLGLAPLMLALALPISLSGPLANLLAVPWVSLVVL
PPALLGTLLLPVPGLGEGLLWLAGYALELLFQVLDCLSRQVPAWVAPQPPPWAWLLGALGALLLIAPAGLPFRGLGLALM
LPVLLPPLERPPTGQADILMLDVGQGLSVLVRTRHHALLYDAGARRGDFDLGERVVVPTLRSLGLDRLDLLLVSHADNDH
AGGAPAVMRGLKVDRLVSGEPGRLDVGRLAEPCQAGEQWRWDGVSFRTWHWAHADDSNDRSCVLTVEAGGERLLLTGDLG
ARGEAAWIASGQPLSSRWLVAGHHGSRTSSTGFFLRRVAPEGVLISRGHLNPYGHPHPRVLSRIRGLPARIHDTAEEGAV
GLRLGGFGPARGAREVPVFWREK

Nucleotide

• Length: 2232 bp

>NTDB_id=67147 KF707C_RS17265 WP_003456206.1 3704488..3706719(-) (comA) [Metapseudomonas furukawaii strain KF707]
ATGCCCGTTTCATGGGGACTGCTGGCGCTGGCCAGCGGCATGCTCGCGTTGCGCTGGATGCCGGCGCTGCCCGCGGCCGG
GACCCTGTTGTTGCAAGCCCTCCTGGGCCTGATTCTGCTGCGCGGCCGTCTGTGGCCATTGGGCCTGTTCCTGCTGGGGC
TGGCCTGGGCCTGCATCGGCGCCCGGATTGCGCTGGACGATCGCCTCGATCCGGCCCTGGACGGCGAGATCCGCTGGCTG
GAGGGGCAGGTCGCAGGGCTTCCGGCCGTCGCCGAGGGGGTGACCCGATTCGAGCTGGAGGACGTACGCTCGCCGCGCGC
GGAGCTGCCCACACGGCTGCGCCTGTCCTGGCACGGTGCGCCAATGGTGCGCGCGGGGGAGCGCTGGCGCCTGGCGGTCA
AACTCAAGCGCCCCCATGGCCTGGTGAATCCAGGCACCTTCGACCATGAGGCGTGGTTGCTGGCGCGGCGCATCGGGGCG
ACCGGCGCGGTGAAGGCCGGCGAGCGCCTGCGGGTCGCCGCCGGCCCCTCGGCCTGGCGCGATGGCCTGCGTCTTCGGCT
GTTAGCCGAGGACGCCGGTGGGCGAGCCGGCGGTCTCGCCGCGCTGGTGCTGGGTGACGGAAGCGGTTTGTCGGTCGCGG
ATTGGCGGCTGCTGCAAGACACCGGCACCACTCACTTGATGGTCATTTCGGGACAGCACATCAGTCTGTTCGCCGGGGTG
CTTTATGGCCTGGTGGCGCTGTTGGCCCGGTTGGGGCTCTGGCCGGGCCGCCTGCCCTGGTTGCCCTGGGCCTGCGGGCT
GGCCTTTGCCGGAGGGCTGGGTTACGGGTTGTTGGCGGGGTTCGATGTACCGGTACAGCGGGCCTGCCTGATGCTCGCCG
TGGTGCTGGTCTGGCGACTTCGCTTCCGCCACCTGGGCCTGTTCGTTCCGCTGTTGGGGGCGCTCTGCACGGTGCTGCTG
GCGGAGCCGCTGGTGGTGCTGCAGCCGGGCTTCTGGTTGTCCTTCGGCTCTGTTGCCCTGCTGGTGCTGGCGTTCGCCGG
CCGCCTCGGCGCCTGGCGCTGGTGGGTTACCTGGTGGCGTGCGCAATGGGTGATGGGGCTTGGCCTGGCGCCACTGATGC
TGGCGCTGGCGTTGCCCATCAGTTTGAGCGGTCCCCTGGCGAACCTGCTGGCGGTGCCTTGGGTGAGCCTGGTAGTGCTG
CCGCCGGCCCTGCTAGGCACCCTGCTGTTGCCGGTCCCGGGGCTGGGCGAAGGCCTGCTCTGGCTGGCGGGGTACGCATT
GGAGCTGCTGTTCCAGGTGCTCGACTGCCTGTCGCGACAAGTGCCGGCATGGGTTGCACCCCAGCCGCCCCCGTGGGCCT
GGCTGCTGGGTGCCCTGGGGGCGCTGTTGCTGATCGCGCCCGCCGGGTTGCCGTTCCGCGGGCTGGGGTTGGCGCTGATG
CTGCCGGTGCTGCTGCCGCCCCTGGAGCGCCCGCCGACGGGGCAGGCGGATATCCTGATGCTCGACGTGGGGCAGGGGCT
TTCAGTGCTGGTCCGTACCCGTCATCACGCGCTGCTCTACGATGCCGGCGCCCGTCGCGGTGACTTCGACCTGGGTGAGC
GGGTCGTGGTGCCGACGCTGCGCAGCCTCGGCCTGGACCGCCTGGACCTGTTGCTGGTCAGCCATGCCGATAACGATCAC
GCCGGCGGCGCACCCGCCGTCATGCGCGGCCTGAAGGTCGATCGGCTGGTCAGCGGCGAACCGGGCAGGCTGGACGTCGG
GCGGCTCGCCGAACCCTGTCAGGCGGGAGAGCAGTGGCGTTGGGATGGCGTGAGCTTTCGCACCTGGCACTGGGCGCACG
CCGACGACAGCAATGACAGATCCTGCGTCCTGACGGTGGAGGCCGGCGGCGAACGCCTGCTGCTCACCGGTGACCTGGGC
GCTCGCGGCGAAGCGGCGTGGATCGCCAGTGGACAGCCCCTTTCCTCGCGCTGGCTGGTGGCCGGGCACCACGGTAGCCG
CACTTCGTCGACCGGGTTCTTCCTGCGTCGGGTGGCGCCGGAAGGGGTGCTAATCTCCCGCGGGCATCTCAATCCTTATG
GCCATCCGCATCCGCGGGTCCTATCGCGGATCCGGGGGCTGCCTGCCCGAATCCACGATACGGCGGAGGAGGGCGCCGTG
GGGCTGCGCCTGGGTGGTTTCGGCCCGGCCCGGGGCGCGCGTGAAGTGCCGGTGTTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-169)

• Competence protein (Competence) (202-466)

• Metallo-beta-lactamase superfamily (Lactamase_B) (502-689)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.389	96.904	0.595
comA	Ralstonia pseudosolanacearum GMI1000	37.191	100	0.385