Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | MUA28_RS06830 | Genome accession | NZ_CP094707 |
| Coordinates | 1433302..1434276 (+) | Length | 324 a.a. |
| NCBI ID | WP_262570428.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain IVB6192 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1428302..1439276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA28_RS06800 (MUA28_06775) | - | 1429111..1429653 (+) | 543 | WP_002481046.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| MUA28_RS06805 (MUA28_06780) | - | 1429666..1431123 (+) | 1458 | WP_262570425.1 | rhomboid family intramembrane serine protease | - |
| MUA28_RS06810 (MUA28_06785) | - | 1431107..1431307 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| MUA28_RS06815 (MUA28_06790) | - | 1431307..1432293 (+) | 987 | WP_262570426.1 | ROK family glucokinase | - |
| MUA28_RS06820 (MUA28_06795) | - | 1432293..1432622 (+) | 330 | WP_002481042.1 | MTH1187 family thiamine-binding protein | - |
| MUA28_RS06825 (MUA28_06800) | - | 1432622..1433245 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| MUA28_RS06830 (MUA28_06805) | comGA | 1433302..1434276 (+) | 975 | WP_262570428.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| MUA28_RS06835 (MUA28_06810) | comGB | 1434248..1435321 (+) | 1074 | WP_057510472.1 | competence type IV pilus assembly protein ComGB | - |
| MUA28_RS06840 (MUA28_06815) | comGC | 1435339..1435668 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| MUA28_RS06845 (MUA28_06820) | comGD | 1435671..1436096 (+) | 426 | WP_262570431.1 | competence type IV pilus minor pilin ComGD | - |
| MUA28_RS06850 (MUA28_06825) | comGF | 1436315..1436809 (+) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| MUA28_RS06855 (MUA28_06830) | - | 1436974..1437513 (+) | 540 | WP_262570433.1 | shikimate kinase | - |
| MUA28_RS06860 (MUA28_06835) | gcvT | 1437692..1438786 (+) | 1095 | WP_262570435.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36898.89 Da Isoelectric Point: 7.5045
>NTDB_id=670881 MUA28_RS06830 WP_262570428.1 1433302..1434276(+) (comGA) [Staphylococcus simulans strain IVB6192]
MKSLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKSLFEKILIDAIAQRVSDIHFIPIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFMKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=670881 MUA28_RS06830 WP_262570428.1 1433302..1434276(+) (comGA) [Staphylococcus simulans strain IVB6192]
ATGAAAAGTCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACACCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGTCTATTTGAAAAAATTTTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACCAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATAACAACGTATCAGAAGTTAC
TTACTTTTATGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGCTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACACCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.991 |
99.691 |
0.608 |
| comGA | Staphylococcus aureus N315 |
60.991 |
99.691 |
0.608 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
39.482 |
95.37 |
0.377 |