Detailed information NTG0670866

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB04_RS27870
• Genome accession: NZ_CP109104
• Coordinates: 6267874..6269157 (+)
• Length: 427 a.a.
• NCBI ID: WP_326692942.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01775
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6262874..6274157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB04_RS27840 (OHB04_27865)	-	6263843..6264037 (+)	195	WP_326690386.1	hypothetical protein	-
OHB04_RS27855 (OHB04_27880)	tig	6264664..6266106 (+)	1443	WP_326690387.1	trigger factor	-
OHB04_RS27860 (OHB04_27885)	clpP	6266378..6266983 (+)	606	WP_326692941.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB04_RS27865 (OHB04_27890)	clpP	6267051..6267710 (+)	660	WP_326690388.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB04_RS27870 (OHB04_27895)	clpX	6267874..6269157 (+)	1284	WP_326692942.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB04_RS27875 (OHB04_27900)	-	6269306..6270157 (-)	852	WP_326690389.1	hypothetical protein	-
OHB04_RS27880 (OHB04_27905)	-	6270428..6271456 (-)	1029	WP_326808549.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46797.42 Da
• Isoelectric Point: 4.7396

>NTDB_id=670866 OHB04_RS27870 WP_326692942.1 6267874..6269157(+) (clpX) [Streptomyces sp. NBC_01775]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWDELPKPREISEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENTPGRDDGIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDVE
NILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQID
TTNVLFIVGGAFAGLEKIIESRAGAKGIGFGADIRSKREIEASNQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDREA
LLQILMEPKNALIKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVERVVITEE
VVHSNVNPTLVPRARGNGDQQHHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=670866 OHB04_RS27870 WP_326692942.1 6267874..6269157(+) (clpX) [Streptomyces sp. NBC_01775]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCAGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCAGAGTCCT
CCGAGGTGCGCTGGGACGAGCTTCCCAAGCCGCGTGAGATCTCTGAGTTCCTGGAGGGCTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGTGAGAACACCCCGGGGCGCGACGA
CGGCATCGAGCTGTCGAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACCCTGCTCGCGCAGACGCTCG
CCCGGATGCTCAACGTCCCCTTCGCCATTGCCGACGCCACGGCGCTCACCGAGGCGGGCTACGTCGGCGAGGACGTCGAG
AACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGAGAT
CGACAAGGTCGCCCGCAAGAGCGAGAACCCCTCGATCACCCGCGATGTCTCCGGTGAAGGTGTCCAGCAGGCGCTGCTGA
AGATCCTGGAGGGCACGACAGCCTCCGTGCCGCCGCAGGGCGGCAGGAAGCACCCGCACCAGGAGTTCATCCAGATCGAC
ACGACGAACGTGCTGTTCATCGTCGGCGGTGCCTTCGCCGGTCTGGAGAAGATCATCGAGTCCCGCGCGGGCGCCAAGGG
CATCGGCTTCGGTGCCGACATCCGCTCCAAGCGCGAGATCGAGGCGAGCAACCAGTTCGAGGAGGTCATGCCGGAGGACC
TGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCCGTCCACAACCTCGACCGCGAGGCG
CTGCTCCAGATCCTGATGGAGCCGAAGAACGCCTTGATCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGTGGAGCT
GGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTCCGGGGCACCGGAGCGCGCGGGCTGCGCGCCA
TCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCCTCCCGCAAGGACGTGGAGCGCGTCGTGATCACCGAAGAG
GTCGTCCACTCCAACGTGAACCCGACCCTGGTGCCGCGGGCCCGTGGCAACGGGGACCAGCAGCACCACGAGAAGAGCGC
CTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (113-310)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.5	93.677	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.257	95.785	0.529