Detailed information NTG0670326

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MP622_RS13015
• Genome accession: NZ_CP094643
• Coordinates: 2756792..2758201 (+)
• Length: 469 a.a.
• NCBI ID: WP_243793532.1
• Uniprot ID: -
• Organism: Acinetobacter sp. PK01
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2751792..2763201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MP622_RS12995 (MP622_12995)	-	2752485..2753105 (-)	621	WP_016168483.1	hypothetical protein	-
MP622_RS13000 (MP622_13000)	pbpG	2753256..2754314 (-)	1059	WP_104441215.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
MP622_RS13005 (MP622_13005)	-	2754532..2755167 (+)	636	WP_016168485.1	response regulator	-
MP622_RS13010 (MP622_13010)	pilS	2755208..2756767 (+)	1560	WP_243791296.1	ATP-binding protein	Regulator
MP622_RS13015 (MP622_13015)	pilR	2756792..2758201 (+)	1410	WP_243793532.1	sigma-54 dependent transcriptional regulator	Regulator
MP622_RS13020 (MP622_13020)	-	2758202..2759368 (-)	1167	WP_104441218.1	S41 family peptidase	-
MP622_RS13025 (MP622_13025)	gpmI	2759392..2760939 (-)	1548	WP_016168489.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
MP622_RS13030 (MP622_13030)	lptG	2761061..2762131 (-)	1071	WP_243791298.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52774.81 Da
• Isoelectric Point: 5.7992

>NTDB_id=670326 MP622_RS13015 WP_243793532.1 2756792..2758201(+) (pilR) [Acinetobacter sp. PK01]
MVAQQPLVLFVDDEEDLCTLMQMMLSRMGIETHVAYRIAQAKKMLSEHHYDVCFTDLNLPDGNGLELVEEISQRYPQLPV
AVLTAYGNMDIAIAALKAGAFDFVSKPIKQTHLEQLLQKALNNPVQPQASSEDALEQRMLIGQSAPIEQLRVTLKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPSDLLESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKAIRPIGSDTEIDVDFRVISASHQDLESLVQQGKFRQDLFFRIHVMDLVLPPLRERGQDILI
LAQHFIQKVCREWEIEVKALTTRAKDFLLAQYYPGNVRELRNIIERAITLSDDDYIDVQHLQSAPLRRSVNTPVLSIDQM
LTAPSELTLAPRKLPDEGLELYLENIEKEILLNALNITHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1410 bp

>NTDB_id=670326 MP622_RS13015 WP_243793532.1 2756792..2758201(+) (pilR) [Acinetobacter sp. PK01]
ATAGTGGCGCAACAACCACTCGTTTTATTTGTAGATGACGAAGAAGACCTATGTACACTGATGCAAATGATGCTCAGCCG
TATGGGGATCGAAACGCATGTGGCTTATCGTATAGCACAGGCCAAAAAAATGTTGTCTGAACATCATTATGATGTTTGTT
TTACGGATTTAAATCTTCCTGACGGCAATGGTTTGGAATTGGTTGAAGAAATTTCTCAACGATATCCACAGTTACCTGTC
GCAGTGCTGACAGCCTACGGCAATATGGATATTGCAATTGCCGCACTCAAAGCGGGGGCTTTTGACTTTGTCAGTAAGCC
GATTAAACAAACTCATCTTGAACAGCTCTTGCAAAAGGCTCTGAATAATCCTGTACAGCCACAAGCTTCTAGTGAAGATG
CACTTGAACAACGCATGTTGATTGGTCAGTCTGCACCCATCGAACAACTCCGCGTGACTTTAAAAAAAATCGCTCGCTCA
CAAGCTCCCGTGTTTATTACAGGTGAATCTGGTACAGGCAAAGAAGTTGTGGCGAACTTGGTACATCGCCTCAGTAATCG
CAACGAAGGCCCTTTTATTGCCATTAACTGTGGTGCGATTCCTTCTGACCTACTCGAAAGCGAGTTGTTTGGACACAAAA
AAGGCAGCTTTACAGGTGCAACTCAAGACAAACAAGGTTTGATTCAATCGGCACATGGCGGAAGTTTATTTCTAGATGAA
ATTGCCGAACTACCACTGAATATGCAGGTCAAATTACTCCGTGCAGTTCAAGAAAAAGCCATTCGTCCAATTGGCTCAGA
TACTGAAATTGATGTCGATTTTCGAGTGATCAGTGCCAGCCATCAAGACTTAGAATCACTGGTGCAACAGGGTAAATTCC
GACAAGACCTGTTTTTCCGCATCCATGTGATGGATCTGGTTCTACCCCCTTTACGCGAGCGTGGTCAGGATATTTTAATT
CTCGCGCAGCATTTTATTCAGAAAGTCTGCCGTGAATGGGAAATTGAAGTCAAAGCACTCACCACACGTGCGAAAGATTT
CTTACTGGCACAGTACTATCCAGGCAATGTTCGTGAACTGCGTAATATTATCGAGCGGGCCATTACTTTAAGTGATGATG
ACTATATTGATGTACAGCATTTACAAAGTGCCCCGTTGCGCCGTAGCGTCAACACCCCAGTATTATCAATCGATCAAATG
TTGACAGCACCTTCAGAATTAACGCTCGCGCCACGGAAACTGCCTGATGAAGGTTTGGAACTTTATCTAGAAAATATTGA
GAAAGAGATTCTGCTCAATGCATTGAATATTACCCATTGGAATCGTACTTTAGCAGCCAAAAAACTAGGGATGTCCTTCC
GCTCTTTGCGTTATCGCCTGAAAAAGTTTGGGCTGGATACAGATGAATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	75	99.787	0.748
pilR	Pseudomonas aeruginosa PAK	48.373	98.294	0.475