Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   MP622_RS13010 Genome accession   NZ_CP094643
Coordinates   2755208..2756767 (+) Length   519 a.a.
NCBI ID   WP_243791296.1    Uniprot ID   -
Organism   Acinetobacter sp. PK01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2750208..2761767
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP622_RS12985 (MP622_12985) thrC 2750473..2751612 (+) 1140 WP_016168481.1 threonine synthase -
  MP622_RS12990 (MP622_12990) - 2751675..2752457 (-) 783 WP_243791294.1 hypothetical protein -
  MP622_RS12995 (MP622_12995) - 2752485..2753105 (-) 621 WP_016168483.1 hypothetical protein -
  MP622_RS13000 (MP622_13000) pbpG 2753256..2754314 (-) 1059 WP_104441215.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  MP622_RS13005 (MP622_13005) - 2754532..2755167 (+) 636 WP_016168485.1 response regulator -
  MP622_RS13010 (MP622_13010) pilS 2755208..2756767 (+) 1560 WP_243791296.1 ATP-binding protein Regulator
  MP622_RS13015 (MP622_13015) pilR 2756792..2758201 (+) 1410 WP_243793532.1 sigma-54 dependent transcriptional regulator Regulator
  MP622_RS13020 (MP622_13020) - 2758202..2759368 (-) 1167 WP_104441218.1 S41 family peptidase -
  MP622_RS13025 (MP622_13025) gpmI 2759392..2760939 (-) 1548 WP_016168489.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 519 a.a.        Molecular weight: 59563.09 Da        Isoelectric Point: 6.5926

>NTDB_id=670325 MP622_RS13010 WP_243791296.1 2755208..2756767(+) (pilS) [Acinetobacter sp. PK01]
MQNSQYFELNQYFFGLWYAAYRLLITSCLVLIFILTQNELATNYEFPQLYFYVLWGYFFINCVQFFNLKHFKQHIPQQFA
FIFIIDVVALSLLTIATNGPSLSISILFLTTIFAASLLLTTQKALIITLIAVIAVIYQQFLISFLTQHSFQNLGNSVILA
VLFFVFYACGQIAVRRFQLLDHVNFSQSQELKRLQNINRYILEQIETGYLVLDENCHIVLSNPAACALLGIAPFYAFDKY
PLYKLQPDLFELLDFAQVQNGEKFQFESQLSRYHLHIEVQKLIVPQQILTLLVIQDGQKMNQQVQQLKLAALGQLSASIA
HEIRNPLAAIVQANELLPHSTVDQQQTLSQMISKQTKRIDKIVQDTLSMVRNQATQPITIQLDHFIPLFIQEDLPDLKTK
ILCHIAPQLSLNFDEAQFRQVLINLIRNAIRHNSPERSTIELHCYTQDKNIHIDVCDFGEGVAIQDQAHLFQPFFSTAIT
GTGLGLYLSHSFCEANQALLSYVEQQQGACFRIQCRQLT

Nucleotide


Download         Length: 1560 bp        

>NTDB_id=670325 MP622_RS13010 WP_243791296.1 2755208..2756767(+) (pilS) [Acinetobacter sp. PK01]
ATGCAAAATTCCCAATATTTCGAATTAAATCAATACTTTTTTGGGCTATGGTATGCCGCTTACCGCTTATTAATCACCAG
TTGTCTGGTCCTGATTTTTATTCTGACCCAAAATGAATTAGCAACCAACTACGAATTTCCTCAACTGTATTTTTATGTAC
TCTGGGGCTATTTTTTCATTAACTGCGTACAATTTTTTAATCTCAAACATTTTAAACAACATATTCCACAACAGTTTGCA
TTCATTTTCATTATCGATGTTGTAGCTTTAAGTCTACTCACCATCGCCACCAATGGTCCAAGTTTAAGTATCAGTATTCT
GTTCTTAACCACCATTTTTGCAGCGTCATTACTCCTCACTACACAGAAAGCGTTAATTATTACCCTCATTGCGGTGATTG
CTGTTATCTATCAACAATTCTTGATCAGCTTTCTAACCCAACACTCATTCCAGAATCTGGGGAATAGTGTGATCTTGGCG
GTTTTATTTTTTGTCTTTTATGCTTGTGGGCAAATTGCAGTTCGACGTTTTCAACTGCTCGATCATGTCAACTTTTCCCA
ATCACAGGAATTAAAACGCCTACAAAATATTAATCGTTATATCTTGGAACAAATTGAAACAGGCTATCTGGTCTTAGATG
AAAACTGCCATATTGTTTTAAGTAACCCTGCCGCCTGTGCTTTATTGGGCATTGCACCATTTTATGCCTTTGATAAATAT
CCACTGTATAAATTACAACCTGATTTGTTTGAGTTACTGGATTTTGCTCAGGTACAAAACGGGGAGAAATTTCAGTTTGA
ATCTCAGCTTAGCCGCTACCATTTGCATATTGAAGTTCAGAAACTGATTGTCCCACAGCAGATACTGACACTTTTGGTAA
TTCAAGATGGGCAGAAGATGAATCAGCAGGTACAACAATTAAAATTGGCTGCACTGGGACAACTCTCAGCCAGTATTGCA
CATGAAATTCGTAATCCATTAGCCGCTATTGTTCAGGCCAATGAGCTCTTGCCACATAGTACGGTTGATCAGCAGCAAAC
GCTGAGCCAAATGATTAGTAAGCAGACCAAACGCATTGACAAAATTGTGCAAGACACCTTAAGTATGGTGCGTAATCAAG
CCACTCAACCCATTACCATTCAGCTTGATCATTTTATTCCTCTTTTTATTCAGGAAGATCTGCCGGATCTTAAAACCAAA
ATTTTATGTCACATTGCTCCTCAACTCAGCTTAAATTTTGATGAGGCACAATTTAGACAGGTATTAATTAATTTAATTCG
CAATGCAATCCGACATAATTCACCTGAACGCAGTACAATAGAACTCCACTGCTATACGCAGGATAAAAACATTCACATTG
ATGTGTGTGATTTTGGGGAAGGCGTGGCGATTCAGGATCAAGCCCACCTGTTTCAACCGTTCTTTAGTACTGCGATTACA
GGAACAGGTTTAGGATTATATCTATCACATAGCTTTTGTGAGGCTAATCAAGCCCTCTTAAGCTATGTAGAACAACAACA
GGGAGCTTGCTTTCGCATTCAATGCCGACAGCTGACTTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(414-514)

His Kinase A (phospho-acceptor) domain (HisKA)

(311-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

56.262

96.917

0.545