Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   MP622_RS03905 Genome accession   NZ_CP094643
Coordinates   806297..807004 (-) Length   235 a.a.
NCBI ID   WP_044738506.1    Uniprot ID   A0A5N4WUF5
Organism   Acinetobacter sp. PK01     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 801297..812004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP622_RS03885 (MP622_03885) - 802273..803592 (+) 1320 WP_044738509.1 adenylosuccinate synthase -
  MP622_RS03890 (MP622_03890) - 803762..804070 (+) 309 WP_016166571.1 hypothetical protein -
  MP622_RS03895 (MP622_03895) - 804183..804959 (+) 777 WP_151503925.1 M48 family metallopeptidase -
  MP622_RS03900 (MP622_03900) - 805089..806138 (-) 1050 WP_243792634.1 NADP(H)-dependent aldo-keto reductase -
  MP622_RS03905 (MP622_03905) crp 806297..807004 (-) 708 WP_044738506.1 cAMP-activated global transcriptional regulator CRP Regulator
  MP622_RS03910 (MP622_03910) - 807153..807575 (+) 423 WP_044738505.1 OsmC family protein -
  MP622_RS03915 (MP622_03915) clpB 807870..810449 (+) 2580 WP_151503927.1 ATP-dependent chaperone ClpB -
  MP622_RS03920 (MP622_03920) - 810660..811949 (+) 1290 WP_243792635.1 DUF945 family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26575.15 Da        Isoelectric Point: 4.5914

>NTDB_id=670309 MP622_RS03905 WP_044738506.1 806297..807004(-) (crp) [Acinetobacter sp. PK01]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSGQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDVSLEQPNTDDDYEDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=670309 MP622_RS03905 WP_044738506.1 806297..807004(-) (crp) [Acinetobacter sp. PK01]
ATGACTTCAAACTTTTCACAGCTGAGCACTGATGCGCTATCGCCAGGTCAATTACCTGAATCAGTCAAAGCATTATTAAA
ACGAGCATATATTAACCGCTACCCTAAACGTACAACTATTGTTGATGCAGGGACGGAGTCAAAATCACTTTATTTGATTT
TAAAAGGGTCAGTATCTATTATTTTACGTGAAGATGATGAGCGTGAAATTGTAGTTGCATATTTAAACCCTGGGGATTTC
TTTGGGGAAATGGGGCTCTTCGAATCAAATCCACAACGTACTGCAGAAGTGCGTACACGTGATGTTTGTGAAATTGCTGA
AATTACCTATGAAAACTTCCATGAGTTAAGTAAACAATACCCTGACTTGAGCTATGCAGTATTTGCTCAATTGGTTCGTC
GCTTAAAAAACACCACACGTAAAGTAACAGACCTTGCATTCATTGATGTTTCTGGTCGTATTGCGCGCTGCTTGATTGAT
CTTTCAGGACAGCCTGAAGCCATGATTTTACCAAATGGTCGCCAAATCCGTATTACACGTCAAGAAATTGGTCGTATTGT
AGGTTGTTCACGCGAAATGGTGGGGCGTGTCCTCAAAACCCTCGAAGATCAAGGCATGATTCAAACTGACGGTAAAGCAA
TTCTTATTTTTGATGTGTCTTTAGAACAGCCCAACACTGATGATGACTATGAAGATGATGAAGAGTAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5N4WUF5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

94.043

100

0.94
  crp Vibrio cholerae strain A1552

46.829

87.234

0.409
  crp Haemophilus influenzae Rd KW20

48.187

82.128

0.396