Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MTO68_RS22065 Genome accession   NZ_CP094620
Coordinates   4673115..4674242 (+) Length   375 a.a.
NCBI ID   WP_244014364.1    Uniprot ID   -
Organism   Acinetobacter sp. NyZ410     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 4668115..4679242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS22040 (MTO68_22040) - 4668282..4668524 (-) 243 WP_239044713.1 DUF4199 domain-containing protein -
  MTO68_RS22045 (MTO68_22045) - 4668567..4670639 (-) 2073 WP_244014360.1 TonB-dependent copper receptor -
  MTO68_RS22050 (MTO68_22050) - 4670710..4671177 (-) 468 WP_244014362.1 DUF2946 domain-containing protein -
  MTO68_RS22055 (MTO68_22055) def 4671286..4671816 (-) 531 WP_004723400.1 peptide deformylase -
  MTO68_RS22060 (MTO68_22060) tsaP 4671940..4673091 (+) 1152 WP_004823724.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MTO68_RS22065 (MTO68_22065) dprA 4673115..4674242 (+) 1128 WP_244014364.1 DNA-processing protein DprA Machinery gene
  MTO68_RS22070 (MTO68_22070) - 4674289..4674858 (+) 570 WP_096735350.1 Sua5/YciO/YrdC/YwlC family protein -
  MTO68_RS22075 (MTO68_22075) - 4675283..4676176 (-) 894 WP_244014366.1 DMT family transporter -
  MTO68_RS22080 (MTO68_22080) - 4676319..4676963 (-) 645 WP_004823720.1 TetR/AcrR family transcriptional regulator -
  MTO68_RS22085 (MTO68_22085) - 4677113..4678351 (+) 1239 WP_171077806.1 MFS transporter -
  MTO68_RS22090 (MTO68_22090) - 4678364..4679110 (+) 747 WP_105714233.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 42079.97 Da        Isoelectric Point: 6.5810

>NTDB_id=670250 MTO68_RS22065 WP_244014364.1 4673115..4674242(+) (dprA) [Acinetobacter sp. NyZ410]
MLKQISNDQYDAIRLWYLVQHSLSAFRKLETHFGSITKALQAENLNRWSEAKIHKNHLERASEFLTVLGQSKFQVCFDKI
QQHTDFILLDTDPHYPQQLLPYPDHPPILFGKGAFQNLSQAQIAIVGSRKPSPHGKQVAYDFAYYLSEKGFFITSGLALG
IDAAAHMGGLKHHRTIAVIGTGLDLVYPSQNKQLQEQILQHAGTILTEYLPETQPIQRNFPYRNRIVSGLSLGVVVAEAQ
LGSGSLITAQAAAEQGKVIFAIPGHIYGEHHQGCHQLIREGAILVDHPEQIVEDLALPTQWHCAQQSESRSPMPEIPEHL
FKLYQLLDWIGQDLDTLAQSANLDIAQLTSDLMELELLGHCIQQSGLYLRCRVSY

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=670250 MTO68_RS22065 WP_244014364.1 4673115..4674242(+) (dprA) [Acinetobacter sp. NyZ410]
ATGTTGAAGCAGATATCCAATGACCAATATGATGCCATCAGACTTTGGTATTTGGTTCAACATTCGCTCAGCGCTTTTCG
TAAATTAGAAACACACTTTGGTTCTATCACAAAAGCGCTGCAAGCTGAAAATTTAAACCGCTGGTCTGAAGCCAAAATTC
ATAAAAACCATCTTGAAAGAGCCAGTGAATTTCTTACTGTGCTTGGGCAATCCAAATTTCAAGTTTGCTTCGATAAAATT
CAACAACATACAGATTTTATTCTTTTAGATACCGACCCTCATTATCCTCAACAACTGTTACCTTATCCTGATCATCCGCC
AATTCTATTTGGTAAAGGTGCATTTCAGAATCTAAGTCAAGCGCAAATCGCCATCGTGGGTAGCCGAAAGCCTAGTCCGC
ATGGCAAACAAGTGGCTTATGATTTTGCTTACTATTTGAGTGAAAAGGGCTTTTTTATTACCAGTGGCCTAGCACTGGGA
ATTGATGCCGCTGCACATATGGGTGGGCTAAAACACCATCGAACCATCGCGGTGATCGGCACAGGCTTAGATCTGGTTTA
TCCTAGTCAAAATAAACAGTTACAAGAACAAATTTTGCAGCATGCAGGAACAATCCTGACTGAATACCTACCAGAAACTC
AGCCTATTCAGCGCAATTTCCCCTATCGAAATCGAATAGTCAGTGGTTTGAGCTTAGGTGTTGTTGTCGCAGAAGCCCAA
CTTGGTAGTGGTTCACTGATTACTGCACAAGCTGCCGCAGAACAAGGTAAAGTGATTTTTGCAATTCCGGGACATATTTA
TGGAGAGCATCATCAAGGATGTCATCAGCTCATTCGTGAAGGAGCCATTCTGGTTGATCATCCAGAACAGATTGTTGAAG
ATTTAGCACTTCCCACCCAATGGCATTGCGCACAACAGTCTGAATCACGCTCCCCAATGCCAGAAATTCCCGAACATTTA
TTTAAGCTATATCAGTTGCTGGATTGGATTGGGCAAGACTTAGATACGCTTGCTCAAAGCGCAAATTTAGACATTGCACA
ACTCACAAGCGATCTTATGGAATTAGAACTTTTGGGTCACTGTATTCAACAATCTGGGCTGTACTTACGTTGCCGAGTCA
GTTATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

64.533

100

0.645

  dprA Acinetobacter baumannii D1279779

64

100

0.64

  dprA Acinetobacter baylyi ADP1

61.097

100

0.624