Detailed information NTG0670117

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MST17_RS01195
• Genome accession: NZ_CP094545
• Coordinates: 255568..256944 (-)
• Length: 458 a.a.
• NCBI ID: WP_218949186.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH16056_T
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 250568..261944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MST17_RS01180 (MST17_01180)	lptG	251612..252682 (+)	1071	WP_078189454.1	LPS export ABC transporter permease LptG	-
MST17_RS01185 (MST17_01185)	gpmI	252805..254352 (+)	1548	WP_180026523.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
MST17_RS01190 (MST17_01190)	-	254370..255545 (+)	1176	WP_180026524.1	S41 family peptidase	-
MST17_RS01195 (MST17_01195)	pilR	255568..256944 (-)	1377	WP_218949186.1	sigma-54 dependent transcriptional regulator	Regulator
MST17_RS01200 (MST17_01200)	pilS	257015..258580 (-)	1566	WP_180026526.1	PAS domain-containing sensor histidine kinase	Regulator
MST17_RS01205 (MST17_01205)	-	258603..259238 (-)	636	WP_078189449.1	response regulator	-
MST17_RS01210 (MST17_01210)	-	259451..260500 (+)	1050	WP_180004717.1	serine hydrolase	-
MST17_RS01215 (MST17_01215)	thrC	260623..261762 (-)	1140	WP_078192584.1	threonine synthase	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 51384.99 Da
• Isoelectric Point: 6.5062

>NTDB_id=670117 MST17_RS01195 WP_218949186.1 255568..256944(-) (pilR) [Acinetobacter sp. YH16056_T]
MLMQMSLSRMGVKTHVAHRLDEAKKALSTYSYDACLTDLNLPDGNGLQLLDWMNEHCPSLPVAVLTAYGNMDIAIAALKA
GAFDFVSKPINPKHLEQLLQKALNKPLAEDITSQDALEHKMLIGESLPIQQLRRTLKKIARSQAPVFITGESGTGKEVVA
NLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFSGATQDKQGLIQSAHGGSLFLDEIAELPLAMQVKLLRAVQE
KRIRPVGSDCEIDVDFRVISASHQDLEALVQQGRFRQDLFFRIHVMDLVLPALRERGDDILLLAQHFIQKISHEWEIATK
PLTERAKNFLLNQYYPGNVRELRNIIERAMTLCDDDQIDLQHLQSAPLRQPSAQFNSATATNESAQLSANSNEQSVVPRK
LPEEGLELFLENIEKEVLMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEDEE

Nucleotide

• Length: 1377 bp

>NTDB_id=670117 MST17_RS01195 WP_218949186.1 255568..256944(-) (pilR) [Acinetobacter sp. YH16056_T]
ATGCTGATGCAGATGTCTTTATCAAGGATGGGGGTTAAAACACATGTTGCGCATCGCCTCGACGAAGCTAAAAAAGCCTT
GTCTACCTATAGCTACGATGCCTGCCTAACCGATCTCAACTTACCGGATGGTAATGGTCTACAGCTCTTAGATTGGATGA
ATGAACACTGTCCTTCCCTACCCGTTGCTGTGCTTACTGCCTATGGCAACATGGACATTGCCATTGCCGCATTAAAGGCG
GGAGCATTCGATTTTGTCAGCAAACCGATCAATCCCAAACATCTTGAACAACTGCTACAAAAAGCCCTGAATAAGCCTTT
GGCCGAAGACATTACTTCGCAAGATGCTTTAGAGCATAAAATGTTAATTGGTGAATCGCTCCCAATCCAGCAATTGCGTC
GAACCTTAAAGAAAATTGCACGTTCACAAGCACCTGTTTTTATTACGGGTGAATCTGGTACAGGTAAAGAGGTCGTGGCC
AATTTGGTTCACCGTTTAAGCAACCGTAATGAAGGACCCTTTATTGCCATTAACTGCGGGGCAATTCCCACAGAGTTAAT
GGAAAGTGAACTTTTTGGTCATAAAAAAGGCAGCTTTAGTGGTGCCACCCAAGACAAACAAGGTCTGATTCAATCTGCAC
ATGGCGGTAGCTTATTTTTGGACGAAATTGCCGAATTACCTTTAGCCATGCAAGTTAAATTGCTACGCGCAGTACAGGAA
AAACGTATACGTCCTGTGGGTTCAGACTGTGAAATTGATGTCGATTTCCGTGTGATCAGTGCCAGTCATCAGGACTTAGA
AGCTCTCGTCCAACAAGGTCGCTTCCGCCAAGATTTATTTTTCCGTATCCATGTGATGGATTTAGTGTTGCCTGCCTTAC
GTGAACGTGGCGACGATATCCTCTTATTGGCGCAACATTTTATTCAAAAAATTAGCCATGAATGGGAAATTGCCACTAAG
CCTCTGACTGAACGAGCGAAAAATTTCCTACTCAACCAATATTATCCGGGTAATGTTCGTGAACTCCGCAATATTATCGA
ACGTGCTATGACCCTCTGCGATGATGATCAGATTGATCTTCAACATCTGCAAAGTGCGCCATTAAGACAACCAAGTGCTC
AGTTCAATTCCGCTACAGCAACGAATGAATCTGCTCAGCTGAGTGCAAACAGCAACGAACAGAGTGTGGTCCCTCGCAAA
CTACCTGAAGAAGGTTTAGAGCTCTTTTTAGAAAATATCGAAAAAGAAGTGCTCATGAATGCGTTAAACCTTACCCATTG
GAACCGAACCCTTGCCGCAAAAAAATTAGGCATGTCATTCCGCTCATTGCGCTATCGTTTGAAAAAATTCGGCTTAGATA
CCGAAGACGAAGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (409-450)

• Sigma-54 interaction domain (Sigma54_activat) (122-288)

• Response regulator receiver domain (Response_reg) (2-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.144	100	0.731
pilR	Pseudomonas aeruginosa PAK	49.227	98.908	0.487