Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MST16_RS03965 Genome accession   NZ_CP094541
Coordinates   836746..837129 (+) Length   127 a.a.
NCBI ID   WP_078191060.1    Uniprot ID   -
Organism   Acinetobacter sp. YH16040_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 831746..842129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MST16_RS03955 (MST16_03950) - 834659..835762 (-) 1104 WP_180009834.1 efflux RND transporter periplasmic adaptor subunit -
  MST16_RS03960 (MST16_03955) - 835809..836402 (-) 594 WP_373683440.1 hypothetical protein -
  MST16_RS03965 (MST16_03960) pilG 836746..837129 (+) 384 WP_078191060.1 twitching motility response regulator PilG Regulator
  MST16_RS03970 (MST16_03965) - 837159..837527 (+) 369 WP_078191059.1 response regulator -
  MST16_RS03975 (MST16_03970) - 837534..838070 (+) 537 WP_111884922.1 chemotaxis protein CheW -
  MST16_RS03980 (MST16_03975) - 838115..840190 (+) 2076 WP_078192256.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7065

>NTDB_id=670084 MST16_RS03965 WP_078191060.1 836746..837129(+) (pilG) [Acinetobacter sp. YH16040_T]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=670084 MST16_RS03965 WP_078191060.1 836746..837129(+) (pilG) [Acinetobacter sp. YH16040_T]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTAATTGATGATTCAAAAACCATTCGTCGTACGGCCGAAACGCTGCT
TCAGCGTGAAGGATGTGAAGTCGTCACTGCTGTAGATGGTTTTGAAGCACTGTCAAAAATTGCCGATGCAAATCCAGATA
TCGTATTTGTCGATATTATGATGCCACGTCTTGATGGCTATCAAACTTGTGCCCTGATTAAAAACTCTCAAAATTATCAA
AATATTCCTGTGATTATGCTTTCAAGTAAAGACGGTTTATTTGATCAGGCGAAGGGTCGTGTTGTGGGTTCGGATGAATA
CTTAACGAAGCCATTCAGTAAAGATGAATTGCTGAATGCAATCCGTAATCACGTTACAGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

41.026

92.126

0.378
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37