Detailed information NTG0669626

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG410_RS15325
• Genome accession: NZ_CP109031
• Coordinates: 3556893..3558179 (-)
• Length: 428 a.a.
• NCBI ID: WP_151471405.1
• Uniprot ID: A0A7J5DDX9
• Organism: Streptomyces sp. NBC_00659 strain NBC 00659
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3551893..3563179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG410_RS15315 (OG410_15340)	-	3553007..3555631 (-)	2625	WP_329299651.1	valine--tRNA ligase	-
OG410_RS15320 (OG410_15345)	-	3555769..3556737 (+)	969	WP_329299653.1	hypothetical protein	-
OG410_RS15325 (OG410_15350)	clpX	3556893..3558179 (-)	1287	WP_151471405.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG410_RS15330 (OG410_15355)	clpP	3558340..3559020 (-)	681	WP_261708770.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG410_RS15335 (OG410_15360)	clpP	3559138..3559743 (-)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG410_RS15340 (OG410_15365)	tig	3560212..3561600 (-)	1389	WP_329299655.1	trigger factor	-
OG410_RS15355 (OG410_15380)	-	3562350..3562544 (-)	195	WP_189314022.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46967.83 Da
• Isoelectric Point: 4.8317

>NTDB_id=669626 OG410_RS15325 WP_151471405.1 3556893..3558179(-) (clpX) [Streptomyces sp. NBC_00659 strain NBC 00659]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=669626 OG410_RS15325 WP_151471405.1 3556893..3558179(-) (clpX) [Streptomyces sp. NBC_00659 strain NBC 00659]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTATGTGGTCGGGCAGGAGTCG
GCGAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACAGCACGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGATGTGTCGGGTGAGGGTGTGCAGCAGGCCC
TGCTCAAGATCCTCGAGGGCACGACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATTCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGGGCTTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGTGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAAGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGCGCAACGTCAACCCGACCCTGATCCCGAGGGACGCCCGCCGCGGCGGCCCCGGCGAGCAGAAGAC
GGCCTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

3D structure

• AlphaFold DB: A0A7J5DDX9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521