Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MRY16_RS11915 Genome accession   NZ_CP094445
Coordinates   2573099..2573482 (-) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter junii strain A2-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2568099..2578482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MRY16_RS11900 (MRY16_11900) - 2570007..2572094 (-) 2088 WP_004950560.1 methyl-accepting chemotaxis protein -
  MRY16_RS11905 (MRY16_11905) - 2572141..2572677 (-) 537 WP_004908738.1 chemotaxis protein CheW -
  MRY16_RS11910 (MRY16_11910) - 2572716..2573078 (-) 363 WP_004664659.1 response regulator -
  MRY16_RS11915 (MRY16_11915) pilG 2573099..2573482 (-) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  MRY16_RS11920 (MRY16_11920) - 2573762..2574430 (+) 669 WP_243483210.1 hypothetical protein -
  MRY16_RS11925 (MRY16_11925) - 2574589..2576304 (+) 1716 WP_004908743.1 proline--tRNA ligase -
  MRY16_RS11930 (MRY16_11930) - 2576364..2576699 (-) 336 WP_243483212.1 YegP family protein -
  MRY16_RS11935 (MRY16_11935) - 2576841..2577185 (-) 345 WP_243483214.1 zinc ribbon domain-containing protein YjdM -
  MRY16_RS11940 (MRY16_11940) - 2577280..2577630 (-) 351 WP_243483216.1 DUF488 family protein -
  MRY16_RS11945 (MRY16_11945) - 2577655..2577990 (-) 336 WP_004963907.1 DUF2004 domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=669544 MRY16_RS11915 WP_004640629.1 2573099..2573482(-) (pilG) [Acinetobacter junii strain A2-1]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=669544 MRY16_RS11915 WP_004640629.1 2573099..2573482(-) (pilG) [Acinetobacter junii strain A2-1]
ATGGAAGATAAATTTCAAAATTTAAAAGTAATGGTGATTGACGATTCTAAAACGATTCGACGTACAGCTGAGACACTGTT
ACAACGCGAAGGTTGTGAGGTGATTACAGCTGTCGATGGTTTTGAAGCATTATCGAAAATTGCGGAAGCAAATCCTGATA
TCGTATTTGTCGATATTATGATGCCTCGTCTAGATGGTTACCAAACCTGTGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCAGTAATCATGTTATCAAGCAAAGATGGTTTGTTTGATCAAGCCAAAGGGCGTGTTGTGGGGTCAGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAGTGCGATTCGTAACCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment