Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   MRY16_RS04770 Genome accession   NZ_CP094445
Coordinates   1009105..1011519 (+) Length   804 a.a.
NCBI ID   WP_243484356.1    Uniprot ID   -
Organism   Acinetobacter junii strain A2-1     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1004105..1016519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MRY16_RS04745 (MRY16_04745) - 1005131..1005601 (+) 471 WP_204378823.1 YaiI/YqxD family protein -
  MRY16_RS04750 (MRY16_04750) - 1005609..1006496 (+) 888 WP_243484353.1 EamA family transporter -
  MRY16_RS04755 (MRY16_04755) - 1006507..1007079 (-) 573 WP_004952935.1 PilZ domain-containing protein -
  MRY16_RS04760 (MRY16_04760) - 1007105..1008340 (+) 1236 WP_004959849.1 lipoprotein-releasing ABC transporter permease subunit -
  MRY16_RS04765 (MRY16_04765) lolD 1008333..1009019 (+) 687 WP_243484355.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  MRY16_RS04770 (MRY16_04770) comA/comEC 1009105..1011519 (+) 2415 WP_243484356.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MRY16_RS04775 (MRY16_04775) - 1011527..1012471 (-) 945 WP_243484358.1 lysophospholipid acyltransferase family protein -
  MRY16_RS04780 (MRY16_04780) sppA 1012610..1013632 (+) 1023 WP_004913625.1 signal peptide peptidase SppA -
  MRY16_RS04785 (MRY16_04785) - 1013807..1014598 (+) 792 WP_004959836.1 alpha/beta hydrolase -
  MRY16_RS04790 (MRY16_04790) purN 1014650..1015279 (-) 630 WP_171053811.1 phosphoribosylglycinamide formyltransferase -
  MRY16_RS04795 (MRY16_04795) purM 1015276..1016346 (-) 1071 WP_243484360.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 804 a.a.        Molecular weight: 92865.40 Da        Isoelectric Point: 8.4188

>NTDB_id=669537 MRY16_RS04770 WP_243484356.1 1009105..1011519(+) (comA/comEC) [Acinetobacter junii strain A2-1]
MLKIILIGWIVGISAMGRDFEIINSTWWIWCCIATLLFIFYKIKNKGHSPFYKSLLLITAIWAMFCAGYHYADQALEKRL
ELRELKSQPFEAVVYIRKINELTEEGVKQQAVVLNRHDQVVNWLMYIKEKDHQPEAFVLGRYYRVYGTIKPAHSYAVQGV
FDQEKWFLQQNLMSAFLVEQIVPLSQDEVYRLGHLQYLKEQNHFLEKIGLKIEIMRFEFRQMLAHSNLQHKGLLLALLTG
DESLLAKDLKKKFQQLGISHLLAISGPHVLIFAIMLTWGLQRVLQHYFPNLYLWQPRQIILAFPFLFSVMVYVAFVGFEI
PALRTLLTVALASFFVITRQAIQPFQLLIYSACLFLIYDPFSILSAAFWLSYGACFILLRIYQTIRTLPKDRIKNRTEDT
KFAIKILIESQWKIFIALMPLVIIFFQQIAWIAPLSNLIAIPILSMLVVPLDIFAACIWLIFPSLCLVLFTLNNMLLSIL
IGLLDVLMSLTPDLQGISYIPLSLFALSVGIFILFMPKGTIPKSWGLVCFLPILFGAKQQKTMLTILDVGQGQSVFLQQA
QHNLMIDTGGSYNEEMFSLGERVIVPFLRQQGIEKLDQMILSHLDQDHSGAFPYIEQVLEITKVYANEKNEKLPFKDNFS
FCHQGQKWNLAQTQVEILSPKIEELSYVQNQQNEYSCVVYIEFEHAKPYRKFLIMGDAGWETEYKLLQQYPDLEVDVILL
GHHGSKHSSAYDFLATIKPKLAIASAGFENRYGHPSIELQQRLRALNIPLLTTSQNGSISFEINHANTVISMYRQQRKWL
NRLQ

Nucleotide


Download         Length: 2415 bp        

>NTDB_id=669537 MRY16_RS04770 WP_243484356.1 1009105..1011519(+) (comA/comEC) [Acinetobacter junii strain A2-1]
ATGTTGAAAATTATATTGATTGGCTGGATTGTGGGTATTTCAGCTATGGGGCGTGATTTTGAAATCATTAATTCAACTTG
GTGGATTTGGTGCTGTATTGCGACTCTTCTATTTATTTTTTATAAAATAAAAAATAAAGGACATTCCCCATTTTATAAGT
CACTGTTATTGATCACTGCGATCTGGGCAATGTTTTGCGCAGGGTATCACTATGCAGATCAAGCTCTAGAAAAAAGACTT
GAATTACGCGAATTAAAATCGCAACCATTTGAGGCTGTTGTTTATATTCGAAAAATAAATGAACTCACTGAAGAGGGTGT
TAAACAGCAAGCTGTAGTTTTAAATCGACATGATCAAGTAGTGAATTGGTTGATGTACATAAAGGAGAAGGATCATCAGC
CAGAAGCTTTTGTATTGGGGCGCTATTATCGAGTTTACGGAACAATCAAACCCGCACACAGTTATGCCGTTCAAGGTGTT
TTTGATCAAGAAAAATGGTTCTTACAACAAAATTTAATGTCAGCATTTTTAGTCGAACAAATCGTACCTTTAAGCCAAGA
TGAGGTGTATAGGCTTGGTCATTTGCAATATTTGAAGGAGCAAAACCATTTTTTGGAGAAAATCGGTCTTAAGATTGAAA
TAATGCGATTTGAATTTAGGCAAATGCTTGCTCATTCAAATTTACAACACAAAGGATTGTTACTTGCGTTGCTTACAGGT
GATGAAAGTTTATTAGCTAAAGATTTAAAGAAAAAATTTCAGCAACTTGGGATTTCACATTTATTGGCGATCTCTGGTCC
TCATGTGCTGATTTTTGCAATCATGTTGACATGGGGATTGCAAAGAGTTTTACAGCATTATTTTCCAAACTTATATCTAT
GGCAACCTCGTCAGATTATTTTGGCTTTTCCATTTTTATTTAGTGTCATGGTGTACGTGGCTTTCGTTGGATTTGAAATT
CCAGCTTTAAGGACGTTATTGACGGTCGCCTTGGCAAGTTTTTTCGTTATCACAAGGCAAGCGATTCAGCCTTTTCAATT
ACTAATTTATAGCGCGTGTTTATTTCTCATCTATGATCCATTTAGTATCTTGTCGGCTGCCTTTTGGTTATCTTACGGTG
CATGTTTCATCCTATTGAGAATTTATCAAACGATCAGAACTCTACCAAAAGACAGAATAAAAAATAGAACTGAGGATACA
AAGTTTGCAATCAAGATTTTGATCGAATCACAATGGAAAATTTTTATCGCCTTAATGCCCTTAGTCATCATTTTTTTCCA
ACAAATTGCTTGGATTGCACCACTCAGTAATCTGATTGCTATCCCGATATTAAGCATGTTGGTTGTACCTCTAGATATTT
TTGCTGCATGTATTTGGCTAATTTTTCCTTCATTATGTCTAGTTTTATTCACCCTCAATAATATGTTGTTAAGCATACTA
ATCGGATTATTAGATGTTTTGATGTCACTGACACCTGATTTACAAGGTATAAGTTATATCCCATTGTCATTATTCGCTTT
GAGTGTCGGGATTTTTATTTTATTTATGCCGAAAGGAACGATACCTAAATCTTGGGGTTTAGTTTGTTTCTTACCTATTT
TATTCGGTGCAAAACAACAAAAGACTATGCTAACCATTTTAGATGTGGGGCAGGGACAATCTGTATTTTTACAACAAGCT
CAGCATAACCTAATGATAGATACTGGTGGTTCATATAATGAAGAGATGTTCAGTTTAGGTGAGCGAGTCATTGTTCCATT
TCTTCGACAGCAGGGCATCGAAAAATTAGATCAAATGATTTTATCGCATCTCGATCAAGACCATAGTGGTGCTTTTCCAT
ATATTGAGCAAGTCCTCGAGATCACAAAGGTTTATGCAAATGAGAAAAATGAAAAATTGCCATTTAAAGATAATTTTTCT
TTTTGTCATCAAGGTCAAAAATGGAATTTAGCTCAAACTCAGGTTGAGATTCTATCTCCAAAAATAGAGGAGCTGAGTTA
TGTTCAAAATCAACAAAATGAATATTCATGTGTTGTGTATATTGAGTTTGAACATGCCAAACCGTATAGAAAATTCTTAA
TTATGGGGGATGCAGGTTGGGAAACAGAATATAAGCTATTACAACAATATCCAGACTTAGAAGTAGATGTCATTCTTTTG
GGGCATCATGGAAGCAAACATAGTTCAGCTTATGATTTTTTAGCAACCATTAAACCTAAATTGGCAATCGCTTCCGCAGG
TTTTGAAAATCGTTATGGTCATCCGAGTATTGAATTACAGCAAAGATTGCGAGCATTAAATATTCCATTGTTGACGACCA
GCCAAAACGGATCGATCTCCTTTGAAATCAATCATGCAAATACCGTAATTTCCATGTACAGACAACAACGTAAATGGTTA
AATCGGTTGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

53.144

100

0.536

  comA/comEC Acinetobacter baumannii strain A118

53.021

100

0.535

  comA/comEC Acinetobacter baylyi ADP1

49.444

100

0.498


Multiple sequence alignment