Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG866_RS11360 Genome accession   NZ_CP109027
Coordinates   2544539..2545318 (+) Length   259 a.a.
NCBI ID   WP_059198553.1    Uniprot ID   A0A3S9I900
Organism   Streptomyces sp. NBC_00663     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2539539..2550318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG866_RS11345 (OG866_11325) - 2539695..2540228 (+) 534 WP_329333900.1 TerD family protein -
  OG866_RS11350 (OG866_11330) - 2540376..2543270 (-) 2895 WP_329333903.1 vitamin B12-dependent ribonucleotide reductase -
  OG866_RS11355 (OG866_11335) nrdR 2543433..2543975 (-) 543 WP_329333905.1 transcriptional regulator NrdR -
  OG866_RS11360 (OG866_11340) dinR/lexA 2544539..2545318 (+) 780 WP_059198553.1 transcriptional repressor LexA Regulator
  OG866_RS11365 (OG866_11345) - 2545470..2547443 (-) 1974 WP_329333907.1 ATP-dependent DNA helicase -
  OG866_RS11370 (OG866_11350) - 2547831..2548661 (-) 831 WP_329333909.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28003.74 Da        Isoelectric Point: 7.0666

>NTDB_id=669537 OG866_RS11360 WP_059198553.1 2544539..2545318(+) (dinR/lexA) [Streptomyces sp. NBC_00663]
MTTTADSATITAQDRSQGRLEPVHAMNEAVNPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAASVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=669537 OG866_RS11360 WP_059198553.1 2544539..2545318(+) (dinR/lexA) [Streptomyces sp. NBC_00663]
GTGACCACCACCGCAGACAGCGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
TGAAGCCGTGAATCCCGAGGGGCACAAGCGCTCCCTACCGGGCCGACCTCCAGGCATCCGGGCCGACAGCTCTGGGCTCA
CCGATCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCCATGCGGGAGATC
GGACAGGCGGTCGGCCTCTCCAGCACGTCCTCCGTCGCACACCAGCTCATGGCACTGGAACGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTCCGCGGCTCCGACCAGGCCGCCTCCGTGCAGCCCACGGACACCGCGGGCA
AGCCCGCCGCGTCGTACGTCCCGCTCGTCGGCCGTATCGCCGCCGGTGGCCCGATCCTCGCGGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTCCCCCGCCAGCTCGTGGGCGACGGTGAGCTGTTCGTCCTCAAGGTGGTCGGCGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTCGCCGCCATGCTCG
ACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACGCCGCGTACGAGCCG
ATCCCCGGCGATGACGCGACGATCCTCGGCAAGGTGGTGGCGGTGCTGCGCCGCGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S9I900

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375

Multiple sequence alignment