Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   MQC90_RS17220 Genome accession   NZ_CP094361
Coordinates   3251227..3252126 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis strain NCIB 3610     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3246227..3257126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQC90_RS17185 mrpE 3246467..3246943 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  MQC90_RS17190 mrpF 3246943..3247227 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MQC90_RS17195 mnhG 3247211..3247585 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  MQC90_RS17200 yuxO 3247624..3248004 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  MQC90_RS17205 comA 3248023..3248667 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MQC90_RS17210 comP 3248748..3251057 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  MQC90_RS17215 comX 3251072..3251239 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  MQC90_RS17220 comQ 3251227..3252126 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  MQC90_RS17225 degQ 3252311..3252451 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MQC90_RS17230 - 3252673..3252798 (+) 126 WP_003228793.1 hypothetical protein -
  MQC90_RS17235 - 3252912..3253280 (+) 369 WP_003243784.1 hypothetical protein -
  MQC90_RS17240 pdeH 3253256..3254485 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  MQC90_RS17245 pncB 3254622..3256094 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  MQC90_RS17250 pncA 3256110..3256661 (-) 552 WP_003243099.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=669308 MQC90_RS17220 WP_003243039.1 3251227..3252126(-) (comQ) [Bacillus subtilis strain NCIB 3610]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=669308 MQC90_RS17220 WP_003243039.1 3251227..3252126(-) (comQ) [Bacillus subtilis strain NCIB 3610]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment