Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   MQC90_RS17205 Genome accession   NZ_CP094361
Coordinates   3248023..3248667 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain NCIB 3610     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3243023..3253667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQC90_RS17170 mrpB 3244215..3244646 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  MQC90_RS17175 mrpC 3244646..3244987 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  MQC90_RS17180 mrpD 3244980..3246461 (+) 1482 WP_003244432.1 Na+/H+ antiporter subunit D -
  MQC90_RS17185 mrpE 3246467..3246943 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  MQC90_RS17190 mrpF 3246943..3247227 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MQC90_RS17195 mnhG 3247211..3247585 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  MQC90_RS17200 yuxO 3247624..3248004 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  MQC90_RS17205 comA 3248023..3248667 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MQC90_RS17210 comP 3248748..3251057 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  MQC90_RS17215 comX 3251072..3251239 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  MQC90_RS17220 comQ 3251227..3252126 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  MQC90_RS17225 degQ 3252311..3252451 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MQC90_RS17230 - 3252673..3252798 (+) 126 WP_003228793.1 hypothetical protein -
  MQC90_RS17235 - 3252912..3253280 (+) 369 WP_003243784.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=669305 MQC90_RS17205 WP_003220716.1 3248023..3248667(-) (comA) [Bacillus subtilis strain NCIB 3610]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=669305 MQC90_RS17205 WP_003220716.1 3248023..3248667(-) (comA) [Bacillus subtilis strain NCIB 3610]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment