Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   MOW12_RS04745 Genome accession   NZ_CP094254
Coordinates   995510..997948 (+) Length   812 a.a.
NCBI ID   WP_242911975.1    Uniprot ID   -
Organism   Acinetobacter indicus strain BDT2076     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 990510..1002948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW12_RS04720 (MOW12_04720) - 991573..992040 (+) 468 WP_005176559.1 YaiI/YqxD family protein -
  MOW12_RS04725 (MOW12_04725) - 992046..992969 (+) 924 WP_104471252.1 EamA family transporter -
  MOW12_RS04730 (MOW12_04730) - 992957..993523 (-) 567 WP_005176561.1 PilZ domain-containing protein -
  MOW12_RS04735 (MOW12_04735) - 993549..994784 (+) 1236 WP_005176562.1 lipoprotein-releasing ABC transporter permease subunit -
  MOW12_RS04740 (MOW12_04740) lolD 994777..995460 (+) 684 WP_242911974.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  MOW12_RS04745 (MOW12_04745) comA/comEC 995510..997948 (+) 2439 WP_242911975.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MOW12_RS04750 (MOW12_04750) - 997945..998889 (-) 945 WP_127800393.1 lysophospholipid acyltransferase family protein -
  MOW12_RS04755 (MOW12_04755) sppA 999020..1000045 (+) 1026 WP_242911976.1 signal peptide peptidase SppA -
  MOW12_RS04760 (MOW12_04760) - 1000042..1000845 (+) 804 WP_005176572.1 alpha/beta hydrolase -
  MOW12_RS04765 (MOW12_04765) purN 1000922..1001551 (-) 630 WP_104500385.1 phosphoribosylglycinamide formyltransferase -
  MOW12_RS04770 (MOW12_04770) purM 1001558..1002628 (-) 1071 WP_005176576.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 812 a.a.        Molecular weight: 92902.00 Da        Isoelectric Point: 7.3824

>NTDB_id=668384 MOW12_RS04745 WP_242911975.1 995510..997948(+) (comA/comEC) [Acinetobacter indicus strain BDT2076]
MLAQNKNKTENDMFKIMGAGWIVGIACMGKTLWPMLDFPLWLSGLLLIILLLQQIAALHWSHLGIQLINTCVAFVITFFL
GLNFAQNQLQERLIFRELTRQPAEVVVYVQQINQLGSSQLRQPVQVLNRHSQPVQWLALLPAEQELQLGRYYRLQGQTLP
AHSFAVPGAFDVEQWYLQQNIMSGFQVQSIVELTESELYRLGFGPHLRQHQQLWPQFKLWIETQRLQIRDFIQQQALQHP
GLILALLTGDKSLLDEATEQQFQRFGMSHLLAISGPHVLIFAAMLCFVLQRLVTRYWPELYAQLPRSYLLLLPFMGCVFV
YCAYVGFEIPALRTLLICLVAGACLLLKQPIQPLSLLIGSASLLLLLDPLSVLSAAFWLSYGACFVLLRIYQTLRQQPVH
PQQTLMQKLWQGFRLLFESQWKIFIALFPLMIIFFKQIAWIAPLSNLLAIPWIGLVTVPLDILAGLSFYLAEPLSQLLFQ
LNDLALSLLLGCLQLLDLLFVPQLIPVALSPPMLLSLVLGLMILFLPAGLVPKAWSALCLLPLLFQDQFSRQVELSVLDV
GQGQAIFLRYREHSMMIDMGGHYDEQKWSIGRQIIQPFLSVKGVQQLDYLWLTHLDQDHSGAYQTLKPQLQVQQVYANAQ
LEVHPDSRFDYCQQGQQWQWQPGIQIQVLSPKPEQLNPVEQQKNESSCVLLVEFAQAQPYSRFLLMGDAGWPTEYQLLQD
YPDLKVDVLVLGHHGSRHSSSYQFLKQLEPKLAIASAGLNNRYGHPSTQVQARLNALKIPLWQTAQQGSIQFYPTENEVL
PYRHTRVWLRRD

Nucleotide


Download         Length: 2439 bp        

>NTDB_id=668384 MOW12_RS04745 WP_242911975.1 995510..997948(+) (comA/comEC) [Acinetobacter indicus strain BDT2076]
ATGCTTGCTCAAAATAAAAATAAGACAGAAAACGACATGTTCAAAATCATGGGTGCCGGCTGGATTGTAGGTATTGCCTG
TATGGGCAAAACGCTATGGCCGATGCTGGATTTCCCGCTCTGGTTGTCAGGCCTGTTACTGATTATCCTGCTTTTACAGC
AAATAGCTGCTTTACATTGGTCCCATCTGGGCATCCAATTGATTAATACCTGTGTGGCATTTGTCATTACATTTTTTTTG
GGGCTGAATTTTGCCCAAAACCAGTTGCAAGAGCGGTTGATATTTCGTGAACTGACCCGCCAGCCGGCAGAGGTGGTGGT
CTATGTCCAGCAAATCAATCAGCTGGGTAGCAGCCAGCTCCGGCAACCGGTTCAGGTGCTGAACCGGCATAGCCAGCCGG
TGCAATGGCTGGCCTTGCTGCCGGCTGAACAGGAACTACAGCTGGGGCGTTATTATCGTTTACAGGGGCAGACCTTGCCG
GCGCACAGTTTTGCCGTTCCGGGTGCGTTTGATGTAGAGCAGTGGTATCTCCAGCAAAATATCATGAGCGGCTTTCAGGT
CCAGTCGATTGTGGAACTGACTGAATCGGAACTGTATCGGCTGGGATTTGGGCCACATTTAAGACAGCATCAGCAACTCT
GGCCGCAATTTAAATTGTGGATCGAAACACAGCGTTTACAGATTCGTGACTTTATCCAGCAGCAGGCATTGCAGCATCCC
GGCTTAATACTGGCACTGCTGACTGGCGATAAAAGTTTACTCGATGAAGCCACCGAGCAGCAGTTTCAGCGTTTCGGGAT
GAGTCATTTGCTGGCGATTTCCGGGCCGCATGTGCTGATTTTTGCCGCCATGCTGTGTTTTGTGCTGCAGCGCCTGGTCA
CTCGCTATTGGCCCGAATTATATGCGCAATTGCCCCGAAGTTATCTGCTGTTGCTGCCGTTTATGGGCTGTGTATTTGTA
TATTGTGCCTATGTTGGGTTTGAAATTCCTGCGCTCAGGACTTTACTGATTTGTCTGGTGGCAGGCGCCTGCCTGTTGCT
AAAGCAGCCGATACAGCCGCTGTCTTTGCTGATTGGTAGTGCTTCGTTATTGCTGCTGCTTGATCCGTTGAGTGTGCTGT
CGGCGGCATTCTGGCTGTCTTATGGCGCCTGCTTTGTGCTGTTAAGGATTTACCAGACCCTCCGGCAACAACCGGTGCAT
CCGCAGCAGACGTTGATGCAGAAATTGTGGCAGGGCTTCCGGCTGTTATTTGAATCGCAATGGAAAATTTTTATTGCGCT
GTTTCCGCTGATGATCATCTTCTTCAAGCAGATTGCCTGGATTGCGCCGCTGAGTAATCTATTGGCCATTCCCTGGATCG
GTCTGGTGACTGTACCGCTGGATATTCTGGCCGGTTTAAGTTTTTATCTGGCGGAACCGCTGAGCCAGTTGCTGTTTCAG
CTCAATGACTTGGCGCTAAGTCTGTTATTGGGTTGTTTGCAGTTGCTGGATTTGCTGTTTGTGCCGCAACTGATTCCGGT
TGCGCTGAGCCCACCGATGCTGCTGAGTCTGGTGCTGGGACTGATGATTTTATTTCTTCCCGCAGGTCTAGTGCCTAAAG
CCTGGTCAGCGCTGTGCTTGTTGCCTTTGCTGTTTCAGGATCAGTTTTCTCGGCAGGTGGAACTTAGTGTGCTGGATGTT
GGGCAAGGGCAGGCGATCTTTTTACGCTATCGTGAACACAGTATGATGATTGATATGGGCGGTCATTATGATGAACAGAA
ATGGAGTATCGGCCGGCAGATTATCCAGCCCTTTTTAAGTGTCAAAGGCGTGCAGCAGTTAGATTATTTATGGTTGACCC
ATCTGGATCAGGATCATAGCGGCGCTTATCAGACCTTAAAGCCACAGTTACAGGTGCAACAGGTCTATGCCAATGCTCAG
CTTGAGGTACATCCGGACAGTCGCTTTGACTATTGCCAGCAAGGACAGCAATGGCAGTGGCAGCCGGGCATCCAGATACA
GGTACTCTCTCCGAAACCGGAGCAGTTAAATCCTGTAGAACAGCAGAAAAATGAAAGTTCCTGTGTGCTGCTGGTCGAGT
TTGCACAGGCTCAGCCTTATTCTCGCTTTTTATTGATGGGTGATGCAGGCTGGCCGACTGAATATCAGTTATTACAGGAT
TATCCGGATTTAAAAGTGGATGTGCTGGTGCTTGGCCATCATGGTAGCCGGCACAGTTCATCTTACCAGTTTTTAAAACA
GCTGGAGCCTAAACTGGCAATTGCATCGGCGGGGCTGAATAACCGTTATGGCCATCCGAGCACGCAGGTACAAGCCCGAC
TGAACGCCTTAAAAATTCCATTATGGCAGACCGCGCAGCAGGGTAGCATCCAGTTTTATCCCACTGAGAATGAGGTGCTA
CCGTACCGGCATACGCGGGTTTGGCTGCGGCGCGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

47.917

100

0.482

  comA/comEC Acinetobacter baylyi ADP1

48.212

99.877

0.482

  comA/comEC Acinetobacter baumannii strain A118

47.426

100

0.477


Multiple sequence alignment