Detailed information
Bioinformatically predicted
Overview
| Name | pilD | Type | Machinery gene |
| Locus tag | MON37_RS09055 | Genome accession | NZ_CP094242 |
| Coordinates | 1916887..1917750 (-) | Length | 287 a.a. |
| NCBI ID | WP_039405476.1 | Uniprot ID | A0A0C1EST5 |
| Organism | Morococcus cerebrosus strain CIP 81.93 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1911887..1922750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MON37_RS09015 (MON37_09015) | - | 1912055..1912454 (-) | 400 | Protein_1740 | IS630 transposase-related protein | - |
| MON37_RS09020 (MON37_09020) | - | 1912638..1913603 (+) | 966 | WP_242883537.1 | IS30 family transposase | - |
| MON37_RS09025 (MON37_09025) | - | 1913632..1913952 (+) | 321 | Protein_1742 | IS30 family transposase | - |
| MON37_RS09030 (MON37_09030) | - | 1914057..1914449 (+) | 393 | WP_039405469.1 | hypothetical protein | - |
| MON37_RS09035 (MON37_09035) | ribF | 1914554..1915483 (+) | 930 | WP_039405471.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MON37_RS09040 (MON37_09040) | yacG | 1915585..1915779 (-) | 195 | WP_070440456.1 | DNA gyrase inhibitor YacG | - |
| MON37_RS09045 (MON37_09045) | - | 1915818..1916099 (-) | 282 | WP_082013583.1 | hypothetical protein | - |
| MON37_RS09050 (MON37_09050) | coaE | 1916256..1916885 (-) | 630 | WP_039405473.1 | dephospho-CoA kinase | - |
| MON37_RS09055 (MON37_09055) | pilD | 1916887..1917750 (-) | 864 | WP_039405476.1 | A24 family peptidase | Machinery gene |
| MON37_RS09060 (MON37_09060) | pilG | 1917752..1918993 (-) | 1242 | WP_039405479.1 | type II secretion system F family protein | Machinery gene |
| MON37_RS09065 (MON37_09065) | pilF | 1919065..1920744 (-) | 1680 | WP_039405482.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| MON37_RS09070 (MON37_09070) | bamE | 1921024..1921491 (-) | 468 | WP_039405485.1 | outer membrane protein assembly factor BamE | - |
| MON37_RS09075 (MON37_09075) | - | 1921559..1922656 (-) | 1098 | WP_039405488.1 | YadA-like family protein | - |
Sequence
Protein
Download Length: 287 a.a. Molecular weight: 31317.59 Da Isoelectric Point: 8.3248
>NTDB_id=668358 MON37_RS09055 WP_039405476.1 1916887..1917750(-) (pilD) [Morococcus cerebrosus strain CIP 81.93]
MLESLDTLAPFAIPLSVIVGLLIGSFLNVVIYRVPVMMERGWTQFAKEHLQLELTEEEQQPFNLMKPDSRCPKCHAPVKA
WQNIPIISYLMLGGKCGSCKTPISIRYPLIELLAGILFGVVAWQYGWTMAAFGGLILTAILIALTFIDADTQYLPDSLTL
PLIWLGLLFNLNGTFVPLKSAVLGAVFGYMSLWLLCFIYKLLTGKIGMGNGDFKLLAALGAWLGGGILPVLVFMAALIGL
IGAIIGRVAKGQYFAFGPSLAIAGWIILVANEPVHRAVTWWLTKSGF
MLESLDTLAPFAIPLSVIVGLLIGSFLNVVIYRVPVMMERGWTQFAKEHLQLELTEEEQQPFNLMKPDSRCPKCHAPVKA
WQNIPIISYLMLGGKCGSCKTPISIRYPLIELLAGILFGVVAWQYGWTMAAFGGLILTAILIALTFIDADTQYLPDSLTL
PLIWLGLLFNLNGTFVPLKSAVLGAVFGYMSLWLLCFIYKLLTGKIGMGNGDFKLLAALGAWLGGGILPVLVFMAALIGL
IGAIIGRVAKGQYFAFGPSLAIAGWIILVANEPVHRAVTWWLTKSGF
Nucleotide
Download Length: 864 bp
>NTDB_id=668358 MON37_RS09055 WP_039405476.1 1916887..1917750(-) (pilD) [Morococcus cerebrosus strain CIP 81.93]
ATGCTGGAATCTTTGGATACATTAGCGCCATTTGCTATTCCTTTATCTGTCATTGTTGGTTTGTTAATCGGAAGTTTCCT
TAATGTCGTCATTTACCGCGTTCCTGTTATGATGGAACGCGGCTGGACTCAGTTTGCGAAAGAGCATTTGCAACTTGAAT
TAACGGAAGAAGAGCAGCAACCATTCAATTTGATGAAGCCGGATTCCCGCTGCCCCAAGTGTCATGCTCCGGTAAAGGCT
TGGCAAAATATTCCGATTATCAGTTATCTGATGCTTGGTGGTAAATGTGGTTCGTGTAAAACGCCCATCAGCATCCGTTA
TCCCTTAATCGAATTATTGGCCGGTATATTGTTTGGCGTAGTGGCGTGGCAATATGGCTGGACGATGGCGGCATTCGGTG
GGTTGATATTGACTGCAATATTGATTGCATTGACCTTTATCGATGCGGATACTCAATATTTACCTGACAGTCTGACCCTG
CCGTTGATATGGTTAGGTTTGCTGTTTAATTTGAACGGCACATTCGTGCCATTGAAATCCGCCGTTTTAGGTGCAGTTTT
CGGCTATATGAGCTTATGGCTGTTATGTTTCATCTATAAGCTTTTGACTGGAAAAATCGGTATGGGTAACGGCGATTTTA
AATTGCTGGCTGCACTAGGTGCATGGCTTGGGGGCGGCATTTTACCTGTATTGGTCTTTATGGCAGCATTAATTGGTCTG
ATTGGAGCGATTATCGGACGGGTTGCCAAAGGACAATATTTTGCTTTCGGTCCGAGTTTGGCTATTGCCGGCTGGATTAT
TTTGGTAGCTAACGAGCCGGTACATCGTGCCGTCACTTGGTGGCTGACCAAATCAGGGTTTTAA
ATGCTGGAATCTTTGGATACATTAGCGCCATTTGCTATTCCTTTATCTGTCATTGTTGGTTTGTTAATCGGAAGTTTCCT
TAATGTCGTCATTTACCGCGTTCCTGTTATGATGGAACGCGGCTGGACTCAGTTTGCGAAAGAGCATTTGCAACTTGAAT
TAACGGAAGAAGAGCAGCAACCATTCAATTTGATGAAGCCGGATTCCCGCTGCCCCAAGTGTCATGCTCCGGTAAAGGCT
TGGCAAAATATTCCGATTATCAGTTATCTGATGCTTGGTGGTAAATGTGGTTCGTGTAAAACGCCCATCAGCATCCGTTA
TCCCTTAATCGAATTATTGGCCGGTATATTGTTTGGCGTAGTGGCGTGGCAATATGGCTGGACGATGGCGGCATTCGGTG
GGTTGATATTGACTGCAATATTGATTGCATTGACCTTTATCGATGCGGATACTCAATATTTACCTGACAGTCTGACCCTG
CCGTTGATATGGTTAGGTTTGCTGTTTAATTTGAACGGCACATTCGTGCCATTGAAATCCGCCGTTTTAGGTGCAGTTTT
CGGCTATATGAGCTTATGGCTGTTATGTTTCATCTATAAGCTTTTGACTGGAAAAATCGGTATGGGTAACGGCGATTTTA
AATTGCTGGCTGCACTAGGTGCATGGCTTGGGGGCGGCATTTTACCTGTATTGGTCTTTATGGCAGCATTAATTGGTCTG
ATTGGAGCGATTATCGGACGGGTTGCCAAAGGACAATATTTTGCTTTCGGTCCGAGTTTGGCTATTGCCGGCTGGATTAT
TTTGGTAGCTAACGAGCCGGTACATCGTGCCGTCACTTGGTGGCTGACCAAATCAGGGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilD | Neisseria gonorrhoeae MS11 |
73.145 |
98.606 |
0.721 |
| pilD | Vibrio cholerae strain A1552 |
47.273 |
95.819 |
0.453 |
| pilD | Acinetobacter nosocomialis M2 |
49.425 |
90.941 |
0.449 |
| pilD | Acinetobacter baumannii D1279779 |
49.042 |
90.941 |
0.446 |
| pilD | Vibrio campbellii strain DS40M4 |
44.727 |
95.819 |
0.429 |