Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilP   Type   Machinery gene
Locus tag   MON40_RS11810 Genome accession   NZ_CP094241
Coordinates   2468948..2469514 (-) Length   188 a.a.
NCBI ID   WP_003765902.1    Uniprot ID   I2NSA2
Organism   Neisseria macacae ATCC 33926     
Function   pseudopilus extrusion and retraction (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2463948..2474514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS11795 (MON40_11795) aroB 2464891..2465970 (-) 1080 WP_003776214.1 3-dehydroquinate synthase -
  MON40_RS11800 (MON40_11800) - 2466056..2466568 (-) 513 WP_301185886.1 shikimate kinase -
  MON40_RS11805 (MON40_11805) pilQ 2466795..2468930 (-) 2136 WP_003776207.1 type IV pilus secretin PilQ Machinery gene
  MON40_RS11810 (MON40_11810) pilP 2468948..2469514 (-) 567 WP_003765902.1 pilus assembly protein PilP Machinery gene
  MON40_RS11815 (MON40_11815) pilO 2469532..2470224 (-) 693 WP_003765893.1 type 4a pilus biogenesis protein PilO -
  MON40_RS11820 (MON40_11820) pilN 2470225..2470842 (-) 618 WP_003759517.1 PilN domain-containing protein Machinery gene
  MON40_RS11825 (MON40_11825) pilM 2470844..2471953 (-) 1110 WP_003776205.1 type IV pilus assembly protein PilM -
  MON40_RS11830 (MON40_11830) - 2472104..2474509 (+) 2406 WP_003776203.1 penicillin-binding protein 1A -

Sequence


Protein


Download         Length: 188 a.a.        Molecular weight: 20626.11 Da        Isoelectric Point: 5.2663

>NTDB_id=668321 MON40_RS11810 WP_003765902.1 2468948..2469514(-) (pilP) [Neisseria macacae ATCC 33926]
MKNTILLVGVLSLAACSPTHDDLNMWIKQTQDEAKVKVTPFQAPTITPPVAYTPPAYNGLNAFDYRRLENAPKGNNAPNL
NRQKETLEAFSLENMRYVGILRGNNKTSGFIDVNGHVYTVMPGNYIGQNYGKIQTITEDKITLTELIEDSSGNWIYRKAE
LPLSTQSDEGSSGASTAESRSESAAIPN

Nucleotide


Download         Length: 567 bp        

>NTDB_id=668321 MON40_RS11810 WP_003765902.1 2468948..2469514(-) (pilP) [Neisseria macacae ATCC 33926]
ATGAAAAATACTATCTTACTCGTAGGTGTTTTGTCTTTAGCAGCATGTTCCCCCACTCATGATGATTTAAATATGTGGAT
AAAACAGACGCAAGATGAAGCTAAAGTTAAGGTTACTCCATTTCAAGCACCGACGATTACTCCGCCAGTTGCATATACTC
CTCCAGCATATAATGGGTTGAATGCGTTTGACTATCGACGTTTGGAAAATGCACCCAAGGGGAATAATGCTCCTAATTTG
AATCGTCAGAAAGAGACATTGGAAGCATTTAGTTTGGAAAATATGCGTTATGTCGGTATTCTGCGTGGTAATAACAAGAC
ATCTGGCTTTATCGATGTAAATGGACATGTTTATACCGTTATGCCGGGCAACTATATCGGTCAAAATTACGGTAAAATCC
AAACGATTACTGAAGATAAAATTACTTTGACTGAATTAATAGAAGACAGTTCTGGTAACTGGATATATCGAAAGGCTGAA
TTGCCGTTAAGTACACAGTCAGATGAAGGTTCAAGTGGTGCTTCGACAGCTGAATCTCGAAGCGAATCTGCCGCAATTCC
AAATTAA

Domains


Predicted by InterproScan.

(22-163)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2NSA2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Neisseria meningitidis MC58

58.788

87.766

0.516


Multiple sequence alignment