Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilL   Type   Machinery gene
Locus tag   MON40_RS06245 Genome accession   NZ_CP094241
Coordinates   1284913..1285404 (+) Length   163 a.a.
NCBI ID   WP_003778412.1    Uniprot ID   A0A9X5PBB8
Organism   Neisseria macacae ATCC 33926     
Function   type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1279913..1290404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS06220 (MON40_06220) dnaB 1280362..1281768 (+) 1407 WP_003778401.1 replicative DNA helicase -
  MON40_RS06225 (MON40_06225) pilH 1281926..1282612 (+) 687 WP_242926034.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  MON40_RS06230 (MON40_06230) pilV 1282626..1283330 (+) 705 WP_050797963.1 type IV pilus modification protein PilV -
  MON40_RS06235 (MON40_06235) - 1283330..1284307 (+) 978 WP_003778408.1 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  MON40_RS06240 (MON40_06240) pilK 1284286..1284900 (+) 615 WP_003778410.1 pilus assembly protein Machinery gene
  MON40_RS06245 (MON40_06245) pilL 1284913..1285404 (+) 492 WP_003778412.1 PilX family type IV pilin Machinery gene
  MON40_RS06250 (MON40_06250) - 1285571..1287040 (+) 1470 WP_003778414.1 hypothetical protein -
  MON40_RS06255 (MON40_06255) - 1287330..1288937 (-) 1608 WP_003778416.1 calcium-binding protein -

Sequence

Protein


Download         Length: 163 a.a.        Molecular weight: 18102.73 Da        Isoelectric Point: 9.3706

>NTDB_id=668309 MON40_RS06245 WP_003778412.1 1284913..1285404(+) (pilL) [Neisseria macacae ATCC 33926]
MNTSITKFQGFTLVEMLIVIAIIGILSTIAYPSYIHYIERGYQSQAHAELVIINNSLKTELVKNPALKMKDEIEGDTGFF
KKYQATSEVAAKYDFSGAMKDKDSKHSRAYYLFATPKSGTNYKLSVWMDSLGNAYKCTDAESAKAKLTTKNGNTGCEPVS
NKK

Nucleotide


Download         Length: 492 bp        

>NTDB_id=668309 MON40_RS06245 WP_003778412.1 1284913..1285404(+) (pilL) [Neisseria macacae ATCC 33926]
ATGAATACGTCTATCACTAAATTTCAAGGGTTTACGCTGGTTGAGATGCTGATTGTCATTGCTATTATCGGCATCCTCAG
CACTATCGCTTACCCTTCCTATATCCATTACATTGAACGCGGCTATCAATCTCAGGCGCATGCTGAATTGGTTATCATCA
ATAATTCCTTGAAAACCGAACTGGTCAAAAACCCTGCCCTTAAAATGAAAGATGAAATTGAGGGAGATACAGGATTTTTT
AAGAAATATCAGGCTACATCTGAGGTCGCGGCTAAATATGATTTCAGTGGCGCAATGAAAGATAAGGACTCTAAACACAG
CAGAGCCTATTATCTTTTTGCTACTCCGAAAAGTGGGACGAATTACAAACTTTCCGTTTGGATGGATAGTTTGGGCAATG
CCTATAAATGTACCGATGCAGAATCGGCTAAAGCCAAGTTAACAACTAAAAACGGTAATACAGGTTGCGAACCTGTTTCA
AATAAAAAGTAG

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(7-31)

Minor type IV pilin, PilX (Pilin_PilX)

(37-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilL Neisseria gonorrhoeae MS11

50

98.16

0.491
  pilX Neisseria meningitidis 8013

48.101

96.933

0.466

Multiple sequence alignment