Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   MP387_RS07935 Genome accession   NZ_CP094226
Coordinates   1634076..1634699 (-) Length   207 a.a.
NCBI ID   WP_242746148.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629076..1639699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS07905 (MP387_07905) - 1629094..1629288 (-) 195 WP_000415531.1 PspC domain-containing protein -
  MP387_RS07910 (MP387_07910) recA 1629458..1630609 (-) 1152 WP_001085517.1 recombinase RecA Machinery gene
  MP387_RS07915 (MP387_07915) cinA 1630664..1631920 (-) 1257 WP_242746142.1 competence/damage-inducible protein A Machinery gene
  MP387_RS07920 (MP387_07920) - 1631993..1633033 (-) 1041 WP_242746144.1 LCP family protein -
  MP387_RS07925 (MP387_07925) - 1633038..1633559 (-) 522 WP_242746146.1 GNAT family N-acetyltransferase -
  MP387_RS07930 (MP387_07930) tsaE 1633549..1633992 (-) 444 WP_061428323.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  MP387_RS07935 (MP387_07935) comM 1634076..1634699 (-) 624 WP_242746148.1 hypothetical protein Regulator
  MP387_RS07940 (MP387_07940) ndk 1634834..1635253 (-) 420 WP_049489472.1 nucleoside-diphosphate kinase -
  MP387_RS07945 (MP387_07945) rpoC 1635363..1639028 (-) 3666 WP_242746168.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23670.63 Da        Isoelectric Point: 9.2521

>NTDB_id=668126 MP387_RS07935 WP_242746148.1 1634076..1634699(-) (comM) [Streptococcus oralis strain 1648]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATMVFLRNPLV
ISSILIYISVGFLCARFLFPKCIQREISFYGHLIRDILFVFSVVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=668126 MP387_RS07935 WP_242746148.1 1634076..1634699(-) (comM) [Streptococcus oralis strain 1648]
ATGGTAAAATCAATTCGCCTATTGTTGTTGATTGCAGTCATCCAGATTAGTTTTTCTAGTTGCCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTGATAGTAGGAATTTCTGTTTTGTGCGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTGCATGTTCAAAAGAAAGTGAGTCTTGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAAACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTGCCCTCCTTTTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTTCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCTACGATGGTTTTCTTGAGGAATCCCTTAGTG
ATTTCCTCGATTCTCATTTATATCAGTGTTGGTTTTCTATGCGCACGTTTCCTTTTTCCCAAATGTATCCAAAGGGAAAT
CTCCTTTTATGGACACCTGATTCGGGATATCCTGTTTGTTTTTTCAGTAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.942

99.517

0.517
  comM Streptococcus pneumoniae R6

51.942

99.517

0.517
  comM Streptococcus pneumoniae TIGR4

51.942

99.517

0.517
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

40.609

95.169

0.386

Multiple sequence alignment