Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   MP387_RS01125 Genome accession   NZ_CP094226
Coordinates   215264..216274 (+) Length   336 a.a.
NCBI ID   WP_001090635.1    Uniprot ID   I0Q241
Organism   Streptococcus oralis strain 1648     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 210264..221274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS01100 (MP387_01100) - 210577..211899 (+) 1323 WP_242747046.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  MP387_RS01105 (MP387_01105) folE 211880..212434 (+) 555 WP_000380931.1 GTP cyclohydrolase I FolE -
  MP387_RS01110 (MP387_01110) folK 212594..213415 (+) 822 WP_242747048.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  MP387_RS01115 (MP387_01115) - 213408..214691 (+) 1284 WP_242747050.1 DUF308 domain-containing protein -
  MP387_RS01120 (MP387_01120) - 214742..215059 (-) 318 WP_242747052.1 DUF960 domain-containing protein -
  MP387_RS01125 (MP387_01125) ccpA 215264..216274 (+) 1011 WP_001090635.1 catabolite control protein A Regulator
  MP387_RS01130 (MP387_01130) - 216327..217289 (-) 963 WP_242747054.1 asparaginase -
  MP387_RS01135 (MP387_01135) - 217355..218746 (+) 1392 WP_242747057.1 Cof-type HAD-IIB family hydrolase -
  MP387_RS01140 (MP387_01140) - 219239..221215 (+) 1977 WP_242747059.1 CAP domain-containing protein -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37214.23 Da        Isoelectric Point: 5.5033

>NTDB_id=668084 MP387_RS01125 WP_001090635.1 215264..216274(+) (ccpA) [Streptococcus oralis strain 1648]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGHSYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=668084 MP387_RS01125 WP_001090635.1 215264..216274(+) (ccpA) [Streptococcus oralis strain 1648]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCGATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCACGTGGTTTGGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATTCCGAACATTACCAATGGTTATTTCTCA
ACGCTTGCTAAGGGGATTGACGACATTGCTGAAATGTACAAGTATAACATTGTCCTAGCAAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTGGTTAACACTCTCTTTTCAAAACAAGTCGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAGTTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTGGATGTAGAACACCAACTTCCAAGT
GTAAATATCGACTACAAACAAGCAACGATTGATGCCGTGAGCTATCTTCTCAAAGAAAACGAAAAGATTGCTTTTGTGAG
TGGACCACTCGTCGATGATATCAATGGCAAGGTTCGTTTAATTGGTTACAAGGAAGCCTTGAAAAAAGCTGGACATTCTT
ATAGTGAGGGATTGGTCTTTGAATCAAAATACAGCTATGACGATGGTTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTGTTGAATGGTTTAGCTGACCATGGTGTATCTGTACC
GGAAGAGTTTGAAATCATCACGACAGATGACTCTCAGATTGCACGATTCACTCGTCCAAACTTGACTACTATTGCCCAAC
CTCTTTATGACTTAGGTGCTATCAGCATGCGTATGTTGACTAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTGCCTCATGGTTTGACAGAGCGCCGCTCTACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0Q241

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.345

100

0.943

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.623

99.405

0.881

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment