Detailed information NTG0667888

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MPG42_RS05400
• Genome accession: NZ_CP094167
• Coordinates: 1132029..1132829 (-)
• Length: 266 a.a.
• NCBI ID: WP_245013734.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe0007
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1127029..1137829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG42_RS05365 (MPG42_05365)	-	1127878..1128663 (-)	786	WP_245028154.1	hypothetical protein	-
MPG42_RS05370 (MPG42_05370)	-	1128669..1129055 (-)	387	WP_154423216.1	DUF1294 domain-containing protein	-
MPG42_RS05375 (MPG42_05375)	-	1129382..1130038 (-)	657	WP_342370347.1	lysozyme	-
MPG42_RS05380 (MPG42_05380)	-	1130067..1130627 (-)	561	WP_245028156.1	hypothetical protein	-
MPG42_RS05385 (MPG42_05385)	-	1130611..1130949 (-)	339	WP_000699916.1	hypothetical protein	-
MPG42_RS05390 (MPG42_05390)	-	1131135..1131496 (-)	362	Protein_1051	tetratricopeptide repeat protein	-
MPG42_RS05395 (MPG42_05395)	dprB	1131628..1132032 (-)	405	WP_060758111.1	Holliday junction resolvase RuvX	Machinery gene
MPG42_RS05400 (MPG42_05400)	dprA	1132029..1132829 (-)	801	WP_245013734.1	DNA-processing protein DprA	Machinery gene
MPG42_RS05405 (MPG42_05405)	minE	1132841..1133074 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
MPG42_RS05410 (MPG42_05410)	minD	1133071..1133877 (-)	807	WP_140596164.1	septum site-determining protein MinD	-
MPG42_RS05415 (MPG42_05415)	ilvC	1133902..1134894 (-)	993	WP_245013733.1	ketol-acid reductoisomerase	-
MPG42_RS05425 (MPG42_05425)	-	1135143..1135925 (+)	783	WP_245028157.1	NAD+ synthase	-
MPG42_RS05430 (MPG42_05430)	-	1135922..1136860 (+)	939	WP_096400335.1	tetraacyldisaccharide 4'-kinase	-
MPG42_RS05435 (MPG42_05435)	pseH	1136793..1137335 (-)	543	WP_000742661.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29844.77 Da
• Isoelectric Point: 8.5925

>NTDB_id=667888 MPG42_RS05400 WP_245013734.1 1132029..1132829(-) (dprA) [Helicobacter pylori strain Hpfe0007]
MKSNFQYSALENIPKVFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMFSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=667888 MPG42_RS05400 WP_245013734.1 1132029..1132829(-) (dprA) [Helicobacter pylori strain Hpfe0007]
ATGAAAAGCAATTTCCAATACAGCGCACTAGAGAATATCCCTAAAGTCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGTTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414