Detailed information NTG0667729

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG67_RS00725
• Genome accession: NZ_CP094156
• Coordinates: 151173..152138 (+)
• Length: 321 a.a.
• NCBI ID: WP_245072922.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe005
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 146173..157138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG67_RS00695 (MPG67_00695)	panD	147580..147930 (+)	351	WP_245050843.1	aspartate 1-decarboxylase	-
MPG67_RS00700 (MPG67_00700)	-	147941..148234 (+)	294	WP_000347916.1	YbaB/EbfC family nucleoid-associated protein	-
MPG67_RS00705 (MPG67_00705)	-	148234..149229 (+)	996	WP_245073320.1	PDZ domain-containing protein	-
MPG67_RS00710 (MPG67_00710)	comB6	149237..150292 (+)	1056	WP_245073322.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG67_RS00715 (MPG67_00715)	comB7	150308..150433 (+)	126	WP_075668089.1	comB7 lipoprotein	Machinery gene
MPG67_RS00720 (MPG67_00720)	comB8	150430..151173 (+)	744	WP_245072921.1	virB8 family protein	Machinery gene
MPG67_RS00725 (MPG67_00725)	comB9	151173..152138 (+)	966	WP_245072922.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG67_RS00730 (MPG67_00730)	comB10	152131..153267 (+)	1137	WP_245050853.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG67_RS00735 (MPG67_00735)	-	153333..154745 (+)	1413	WP_245050855.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG67_RS00740 (MPG67_00740)	gmd	154760..155905 (+)	1146	WP_017283482.1	GDP-mannose 4,6-dehydratase	-
MPG67_RS00745 (MPG67_00745)	-	155898..156830 (+)	933	WP_245050859.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 321 a.a.
• Molecular weight: 36866.42 Da
• Isoelectric Point: 9.3758

>NTDB_id=667729 MPG67_RS00725 WP_245072922.1 151173..152138(+) (comB9) [Helicobacter pylori strain Hpfe005]
MRKVLCTLVGFLLVSSALKADDFLEEANETAPAHLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLEKAPTNNNKSLKEEKEETKEEETITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKS
KLSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFVKKGKD
E

Nucleotide

• Length: 966 bp

>NTDB_id=667729 MPG67_RS00725 WP_245072922.1 151173..152138(+) (comB9) [Helicobacter pylori strain Hpfe005]
ATGCGTAAGGTTTTATGCACTCTTGTGGGCTTTTTGTTGGTTTCTAGCGCTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCGGCGCATTTAAACCACCCCATGCAAGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGCTTTGATGCGAAAATCTTAGAGAG
TAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGA
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCACAAAACAAAGAAAATACCCTTGAAAAGGCCCCCACAAACAATAACAAATCCTT
AAAAGAAGAAAAAGAAGAAACTAAAGAAGAAGAGACTATAACGATTGGCGATAACACTAATGCAATGAAAATCGTTAAAA
AAGACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCC
AAACTCTCTTTGATGCCTGAAGAAATTTTCAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTC
TAAATTCCCAGTGATTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTGGGCGATTACATTATCG
CTGAAGATGTCTCGGCTAAATGGACTTTAAGATTAGGTAAGGACTATTTGTGTATCCGTTTTGTCAAAAAGGGTAAAGAT
GAATAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	91.104	100	0.925