Detailed information    

insolico Bioinformatically predicted

Overview


Name   dinR/lexA   Type   Regulator
Locus tag   OHA79_RS33435 Genome accession   NZ_CP108853
Coordinates   7317897..7318691 (-) Length   264 a.a.
NCBI ID   WP_266980763.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00841     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context


Location: 7312897..7323691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA79_RS33420 (OHA79_33415) - 7313092..7313838 (+) 747 WP_266980769.1 GNAT family N-acetyltransferase -
  OHA79_RS33425 (OHA79_33420) - 7313899..7315758 (+) 1860 WP_266980767.1 IucA/IucC family siderophore biosynthesis protein -
  OHA79_RS33430 (OHA79_33425) - 7315809..7317779 (+) 1971 WP_266980765.1 ATP-dependent DNA helicase -
  OHA79_RS33435 (OHA79_33430) dinR/lexA 7317897..7318691 (-) 795 WP_266980763.1 transcriptional repressor LexA Regulator
  OHA79_RS33440 (OHA79_33435) nrdR 7319245..7319757 (+) 513 WP_266980761.1 transcriptional regulator NrdR -
  OHA79_RS33445 (OHA79_33440) - 7319919..7322822 (+) 2904 WP_266980759.1 vitamin B12-dependent ribonucleotide reductase -
  OHA79_RS33450 (OHA79_33445) - 7322921..7323457 (-) 537 WP_266980757.1 TerD family protein -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 28609.35 Da        Isoelectric Point: 7.4239

>NTDB_id=667655 OHA79_RS33435 WP_266980763.1 7317897..7318691(-) (dinR/lexA) [Streptomyces sp. NBC_00841]
MTTTADSATITAQDRSQSRLQPVHAMNDSVTNTEGPEPARPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
SAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=667655 OHA79_RS33435 WP_266980763.1 7317897..7318691(-) (dinR/lexA) [Streptomyces sp. NBC_00841]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCCAGCCGGTGCATGCCATGAA
TGACTCAGTCACGAACACGGAGGGGCCGGAGCCGGCACGACCGGCACGCTCGCTCCCCGGCCGACCTCCAGGCATCCGAG
CGGACAGCTCGGGGCTCACGGACCGCCAACGGCGCGTGATCGAGGTCATCCGGGATTCCGTGCAACGCCGGGGATACCCG
CCATCGATGCGGGAGATCGGTCAGGCGGTGGGCCTGTCCAGCACGTCCTCCGTCGCCCACCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCGCACCGGCCCCGGGCGTACGAGGTCCGTGGTTCGGATCAGCCCAGTACGCAGCCGA
CCGATACGACCGGCAAGCCCGCGGCATCGTACGTACCGCTCGTCGGGCGGATCGCAGCCGGTGGCCCGATCCTTGCCGAG
GAATCGGTCGAGGACGTCTTTCCGCTCCCCCGCCAGCTGGTCGGGGACGGCGAGCTGTTCGTTCTGAAGGTCGTCGGCGA
CTCGATGATCGAGGCGGCGATCTGTGACGGCGACTGGGTCACCGTCCGCCGTCAGCCCGTAGCGGAGAACGGCGACATCG
TGGCCGCGATGCTGGATGGCGAGGCCACCGTCAAGCGCTTCAAGCGGGAGGATGGCCATGTCTGGCTGCTCCCGCACAAC
TCCGCGTACCAGCCGATCCCTGGCGACGAGGCAACCATCCTCGGCAAGGTCGTGGCGGTGCTACGGCGGGTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371


Multiple sequence alignment