Detailed information NTG0667360

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG584_RS23940
• Genome accession: NZ_CP108826
• Coordinates: 5466725..5468017 (+)
• Length: 430 a.a.
• NCBI ID: WP_405780783.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00859
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5461725..5473017

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG584_RS23910 (OG584_23935)	-	5462307..5462501 (+)	195	WP_164261160.1	hypothetical protein	-
OG584_RS23925 (OG584_23950)	tig	5463534..5464922 (+)	1389	WP_405780781.1	trigger factor	-
OG584_RS23930 (OG584_23955)	-	5465228..5465833 (+)	606	WP_405784247.1	ATP-dependent Clp protease proteolytic subunit	-
OG584_RS23935 (OG584_23960)	clpP	5465885..5466568 (+)	684	WP_405780782.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG584_RS23940 (OG584_23965)	clpX	5466725..5468017 (+)	1293	WP_405780783.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG584_RS23945 (OG584_23970)	-	5468120..5469142 (-)	1023	WP_405780784.1	hypothetical protein	-
OG584_RS23950 (OG584_23975)	-	5469281..5471902 (+)	2622	WP_405780785.1	valine--tRNA ligase	-
OG584_RS23955 (OG584_23980)	-	5471985..5472998 (-)	1014	WP_405780786.1	rod shape-determining protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47118.83 Da
• Isoelectric Point: 4.7323

>NTDB_id=667360 OG584_RS23940 WP_405780783.1 5466725..5468017(+) (clpX) [Streptomyces sp. NBC_00859]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRQDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=667360 OG584_RS23940 WP_405780783.1 5466725..5468017(+) (clpX) [Streptomyces sp. NBC_00859]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTTCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGCACCAGCCG
CGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CACTGGCGCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTCACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTGTCGGGCGAGGGTGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACGGCCTCGGTGCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGTTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGT
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCCTCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGAGCACGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCCAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGGGAGCCGCGGATCGTCGGCAACGACGGACGGCACGA
GAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.524	93.721	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	52.913	95.814	0.507