Detailed information NTG0667191

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG01_RS00720
• Genome accession: NZ_CP094124
• Coordinates: 155726..156688 (+)
• Length: 320 a.a.
• NCBI ID: WP_245037787.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe057
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 150726..161688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG01_RS00690 (MPG01_00690)	panD	152141..152491 (+)	351	WP_000142213.1	aspartate 1-decarboxylase	-
MPG01_RS00695 (MPG01_00695)	-	152502..152795 (+)	294	WP_000347923.1	YbaB/EbfC family nucleoid-associated protein	-
MPG01_RS00700 (MPG01_00700)	-	152795..153790 (+)	996	WP_245038366.1	PDZ domain-containing protein	-
MPG01_RS00705 (MPG01_00705)	comB6	153796..154851 (+)	1056	WP_000786667.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG01_RS00710 (MPG01_00710)	comB7	154867..154992 (+)	126	WP_001217867.1	hypothetical protein	Machinery gene
MPG01_RS00715 (MPG01_00715)	comB8	154989..155726 (+)	738	WP_000660546.1	virB8 family protein	Machinery gene
MPG01_RS00720 (MPG01_00720)	comB9	155726..156688 (+)	963	WP_245037787.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG01_RS00725 (MPG01_00725)	comB10	156681..157835 (+)	1155	WP_245037789.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG01_RS00730 (MPG01_00730)	-	157886..159298 (+)	1413	WP_245037791.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG01_RS00735 (MPG01_00735)	gmd	159312..160457 (+)	1146	WP_245037792.1	GDP-mannose 4,6-dehydratase	-
MPG01_RS00740 (MPG01_00740)	-	160450..161382 (+)	933	WP_245037793.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36831.40 Da
• Isoelectric Point: 9.4585

>NTDB_id=667191 MPG01_RS00720 WP_245037787.1 155726..156688(+) (comB9) [Helicobacter pylori strain Hpfe057]
MRKVLYALVGFLLAFSTLKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKIFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLEKAPTNNKPLKEEKEETKEEETVTIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRLGKDYLCIRFIKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=667191 MPG01_RS00720 WP_245037787.1 155726..156688(+) (comB9) [Helicobacter pylori strain Hpfe057]
ATGCGTAAGGTTTTATACGCTCTTGTGGGCTTTTTGTTGGCTTTTAGCACTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCAGCGAATTTAAACCACCCCATGCAAGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGTTTTGATGCGAAAATTTTAGAAAG
TAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGA
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCCAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCACAAAACAAAGAAAACACCCTTGAAAAGGCCCCCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTGTAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACCTATTTCAAATTTGACAAAAAATTAGCACTCTCTAA
ATTCCCGGTGATTTATAAAGTCGTTGATGGCTATGATAACCCAGTGAATACTAGGATTGTGGGCGATTACATTATCGCTG
AAGATGTCTCGGCTAAATGGACTTTAAGATTAGGTAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	92.638	100	0.944