NTDB

Overview

Name	dprA	Type	Machinery gene
Locus tag	MPG69_RS05535	Genome accession	NZ_CP094096
Coordinates	1170942..1171742 (-)	Length	266 a.a.
NCBI ID	WP_245055348.1	Uniprot ID	-
Organism	Helicobacter pylori strain Hpfe082
Function	ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1165942..1176742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG69_RS05505 (MPG69_05505)	-	1166978..1168054 (-)	1077	WP_245055340.1	site-specific integrase	-
MPG69_RS05510 (MPG69_05510)	-	1168490..1168891 (-)	402	WP_245055342.1	glycoside hydrolase family protein	-
MPG69_RS05515 (MPG69_05515)	-	1168999..1169559 (-)	561	WP_245055344.1	hypothetical protein	-
MPG69_RS05520 (MPG69_05520)	-	1169543..1169881 (-)	339	WP_220906329.1	hypothetical protein	-
MPG69_RS05525 (MPG69_05525)	-	1170071..1170506 (-)	436	Protein_1081	tetratricopeptide repeat protein	-
MPG69_RS05530 (MPG69_05530)	dprB	1170541..1170945 (-)	405	WP_245055346.1	Holliday junction resolvase RuvX	Machinery gene
MPG69_RS05535 (MPG69_05535)	dprA	1170942..1171742 (-)	801	WP_245055348.1	DNA-processing protein DprA	Machinery gene
MPG69_RS05540 (MPG69_05540)	minE	1171754..1171987 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
MPG69_RS05545 (MPG69_05545)	minD	1171984..1172790 (-)	807	WP_001019098.1	septum site-determining protein MinD	-
MPG69_RS05550 (MPG69_05550)	ilvC	1172809..1173801 (-)	993	WP_245055350.1	ketol-acid reductoisomerase	-
MPG69_RS05560 (MPG69_05560)	-	1174050..1174832 (+)	783	WP_245055352.1	NAD+ synthase	-
MPG69_RS05565 (MPG69_05565)	-	1174829..1175767 (+)	939	WP_245055354.1	tetraacyldisaccharide 4'-kinase	-
MPG69_RS05570 (MPG69_05570)	pseH	1175700..1176242 (-)	543	WP_060869628.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

Download Length: 266 a.a. Molecular weight: 29794.71 Da Isoelectric Point: 8.5925

                                >NTDB_id=666799 MPG69_RS05535 WP_245055348.1 1170942..1171742(-) (dprA) [Helicobacter pylori strain Hpfe082]

MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDTPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV

DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG

SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY

LKFGDKLLEYELLGKIKRINHIVVLS

Nucleotide

Download Length: 801 bp

                                >NTDB_id=666799 MPG69_RS05535 WP_245055348.1 1170942..1171742(-) (dprA) [Helicobacter pylori strain Hpfe082]

ATGAAAAGCAACTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT

CTATTGTGTGGGCGATATAAAGCTTTTAGACACGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA

GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG

GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCCACGAA

CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG

GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC

TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTACCTCAGCGTCTGAATGAGAGCGATGG

CACTAATGAACTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC

ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT

CTCAAATTTGGGGACAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTATCGTG

A

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(12-197)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414

Detailed information NTG0666799