Detailed information NTG0666336

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MPF94_RS05560
• Genome accession: NZ_CP094065
• Coordinates: 1161196..1161996 (-)
• Length: 266 a.a.
• NCBI ID: WP_245021873.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe112
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1156196..1166996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPF94_RS05520 (MPF94_05520)	-	1157051..1157836 (-)	786	WP_245021869.1	hypothetical protein	-
MPF94_RS05525 (MPF94_05525)	-	1157836..1158222 (-)	387	WP_245021870.1	DUF1294 domain-containing protein	-
MPF94_RS05530 (MPF94_05530)	-	1158548..1158709 (-)	162	WP_229765080.1	lysozyme	-
MPF94_RS05535 (MPF94_05535)	-	1158729..1159229 (-)	501	WP_245021871.1	glycoside hydrolase family protein	-
MPF94_RS05540 (MPF94_05540)	-	1159240..1159800 (-)	561	WP_245021872.1	hypothetical protein	-
MPF94_RS05545 (MPF94_05545)	-	1159784..1160122 (-)	339	WP_000699911.1	hypothetical protein	-
MPF94_RS05550 (MPF94_05550)	-	1160310..1160672 (-)	363	WP_245022563.1	tetratricopeptide repeat protein	-
MPF94_RS05555 (MPF94_05555)	dprB	1160795..1161199 (-)	405	WP_075645903.1	Holliday junction resolvase RuvX	Machinery gene
MPF94_RS05560 (MPF94_05560)	dprA	1161196..1161996 (-)	801	WP_245021873.1	DNA-processing protein DprA	Machinery gene
MPF94_RS05565 (MPF94_05565)	minE	1162008..1162241 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
MPF94_RS05570 (MPF94_05570)	minD	1162238..1163044 (-)	807	WP_245021874.1	septum site-determining protein MinD	-
MPF94_RS05575 (MPF94_05575)	ilvC	1163069..1164061 (-)	993	WP_245021875.1	ketol-acid reductoisomerase	-
MPF94_RS05585 (MPF94_05585)	-	1164310..1165092 (+)	783	WP_245021876.1	NAD+ synthase	-
MPF94_RS05590 (MPF94_05590)	-	1165089..1166027 (+)	939	WP_245021877.1	tetraacyldisaccharide 4'-kinase	-
MPF94_RS05595 (MPF94_05595)	pseH	1165960..1166502 (-)	543	WP_245021878.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29820.81 Da
• Isoelectric Point: 9.3276

>NTDB_id=666336 MPF94_RS05560 WP_245021873.1 1161196..1161996(-) (dprA) [Helicobacter pylori strain Hpfe112]
MKSHFQYSALENIPKAFDMLKDPPKKLYCVGDTKLLRAPLKVAIIGTRRPTPYSKQYTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKGFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=666336 MPF94_RS05560 WP_245021873.1 1161196..1161996(-) (dprA) [Helicobacter pylori strain Hpfe112]
ATGAAAAGCCACTTCCAATACAGCGCACTAGAGAATATCCCTAAAGCCTTTGACATGCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCTACCCCTTATA
GCAAGCAATACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACAAA
CAACCATAAAGTGATCCAAGAAATTGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGGTTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGTGCTAGACTCGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTAAATGAGAGTGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTGGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGCTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41