Detailed information NTG0666308

Bioinformatically predicted

Overview

• Name: comB9
• Type: Machinery gene
• Locus tag: MPG37_RS00745
• Genome accession: NZ_CP094064
• Coordinates: 155727..156689 (+)
• Length: 320 a.a.
• NCBI ID: WP_245051203.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe114
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 150727..161689

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG37_RS00715 (MPG37_00715)	panD	152134..152484 (+)	351	WP_180461662.1	aspartate 1-decarboxylase	-
MPG37_RS00720 (MPG37_00720)	-	152495..152788 (+)	294	WP_000347922.1	YbaB/EbfC family nucleoid-associated protein	-
MPG37_RS00725 (MPG37_00725)	-	152788..153783 (+)	996	WP_245051718.1	PDZ domain-containing protein	-
MPG37_RS00730 (MPG37_00730)	comB6	153791..154846 (+)	1056	WP_245051720.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG37_RS00735 (MPG37_00735)	comB7	154862..154987 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG37_RS00740 (MPG37_00740)	comB8	154984..155727 (+)	744	WP_140563071.1	virB8 family protein	Machinery gene
MPG37_RS00745 (MPG37_00745)	comB9	155727..156689 (+)	963	WP_245051203.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG37_RS00750 (MPG37_00750)	comB10	156682..157818 (+)	1137	WP_245051204.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG37_RS00755 (MPG37_00755)	-	157888..159300 (+)	1413	WP_245051209.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
MPG37_RS00760 (MPG37_00760)	gmd	159314..160459 (+)	1146	WP_245051210.1	GDP-mannose 4,6-dehydratase	-
MPG37_RS00765 (MPG37_00765)	-	160452..161384 (+)	933	WP_245051212.1	GDP-L-fucose synthase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 36821.36 Da
• Isoelectric Point: 9.4585

>NTDB_id=666308 MPG37_RS00745 WP_245051203.1 155727..156689(+) (comB9) [Helicobacter pylori strain Hpfe114]
MRKVLYALVSFLLAFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNVDYFQGQTYKIRLRYAMA
TLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDNEGKVFSFYVFSTTFTSSKHPNLQVFIEDKN
YYSNAFMKPQNKENTLEKALTNNKPLKEEKEETKEEETITIGDNTNAMKIVKKDIQKGYRALKSSQRKWYCLGICSKKSK
LSLMPEEIFNDKQFTYFKFDKKLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSAKWTLRSGKDYLCIRFIKKGKDE

Nucleotide

• Length: 963 bp

>NTDB_id=666308 MPG37_RS00745 WP_245051203.1 155727..156689(+) (comB9) [Helicobacter pylori strain Hpfe114]
ATGCGTAAGGTTTTATACGCTCTTGTGAGCTTTTTGTTGGCTTTTAGCGCTTTAAAAGCCGATGATTTTTTAGAAGAAGC
TAACGAAACAGCCCCGGCGAATTTAAACCACCCCATGCAGGATTTAAACGCCATTCAAGGGAGCTTTTTTGACAAAAACC
GCTCAAAAATGTCCAACACTTTGAATGTTGATTACTTTCAAGGGCAAACCTATAAAATCCGCTTGCGTTATGCGATGGCG
ACCTTATTGTTTTTTTCAAAACCCATTAGCGATTTTGTTTTAGGGGATAAGGTGGGCTTTGATGCGAAAATTTTAGAAAG
TAACGATCGCATTTTGCTCATCAAACCCCTACAAATTGGCGTGGATTCTAATATCAGCGTGATTGATAATGAGGGTAAGG
TTTTTTCTTTCTATGTGTTTTCTACCACTTTCACTAGCTCTAAACACCCTAATTTACAGGTTTTCATAGAAGATAAAAAT
TATTATTCCAACGCTTTTATGAAGCCGCAAAACAAAGAAAATACCCTTGAAAAGGCCCTCACAAACAACAAACCCTTAAA
AGAAGAAAAAGAAGAAACCAAAGAAGAAGAGACTATAACCATTGGCGATAACACTAATGCAATGAAAATCGTTAAAAAAG
ACATTCAAAAAGGTTATAGGGCTTTAAAAAGCTCTCAAAGGAAATGGTATTGTTTAGGGATTTGTTCTAAAAAATCCAAA
CTCTCTTTGATGCCTGAAGAAATTTTTAACGACAAGCAATTCACTTATTTCAAATTTGACAAAAAATTAGCGCTCTCCAA
ATTCCCGGTGATTTATAAAGTCGTTGATGGCTATGATAACCCGGTGAATACTAGGATTGTAGGCGATTACATTATCGCTG
AAGATGTCTCGGCTAAATGGACTTTAAGATCGGGCAAGGACTATTTGTGTATCCGTTTTATCAAAAAGGGTAAAGATGAA
TAA

Domains

Predicted by InterproScan.

• Conjugal transfer protein (CagX) (62-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB9	Helicobacter pylori P1	92.331	100	0.941