Detailed information NTG0666305

Bioinformatically predicted

Overview

• Name: comB6
• Type: Machinery gene
• Locus tag: MPG37_RS00730
• Genome accession: NZ_CP094064
• Coordinates: 153791..154846 (+)
• Length: 351 a.a.
• NCBI ID: WP_245051720.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe114
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 148791..159846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG37_RS00700 (MPG37_00700)	-	149214..149627 (+)	414	WP_001023005.1	universal stress protein	-
MPG37_RS00705 (MPG37_00705)	-	149647..149922 (+)	276	WP_000784917.1	ATP-dependent Clp protease adaptor ClpS	-
MPG37_RS00710 (MPG37_00710)	-	149922..152144 (+)	2223	WP_245051201.1	ATP-dependent Clp protease ATP-binding subunit	-
MPG37_RS00715 (MPG37_00715)	panD	152134..152484 (+)	351	WP_180461662.1	aspartate 1-decarboxylase	-
MPG37_RS00720 (MPG37_00720)	-	152495..152788 (+)	294	WP_000347922.1	YbaB/EbfC family nucleoid-associated protein	-
MPG37_RS00725 (MPG37_00725)	-	152788..153783 (+)	996	WP_245051718.1	PDZ domain-containing protein	-
MPG37_RS00730 (MPG37_00730)	comB6	153791..154846 (+)	1056	WP_245051720.1	P-type conjugative transfer protein TrbL	Machinery gene
MPG37_RS00735 (MPG37_00735)	comB7	154862..154987 (+)	126	WP_001217874.1	hypothetical protein	Machinery gene
MPG37_RS00740 (MPG37_00740)	comB8	154984..155727 (+)	744	WP_140563071.1	virB8 family protein	Machinery gene
MPG37_RS00745 (MPG37_00745)	comB9	155727..156689 (+)	963	WP_245051203.1	TrbG/VirB9 family P-type conjugative transfer protein	Machinery gene
MPG37_RS00750 (MPG37_00750)	comB10	156682..157818 (+)	1137	WP_245051204.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG37_RS00755 (MPG37_00755)	-	157888..159300 (+)	1413	WP_245051209.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 39877.85 Da
• Isoelectric Point: 8.8142

>NTDB_id=666305 MPG37_RS00730 WP_245051720.1 153791..154846(+) (comB6) [Helicobacter pylori strain Hpfe114]
MKNDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSVVALAFMLFAYKSLKEQNLFSTSTLTEALLFVGFFALFNY
ALKNPMHFYEFFQNAIFIAPNMITQSLSQSLSNFSNHTLSLDFIFNHGFYALSFISDLSHNEMSVWLFLSILQGLFLSVL
FAIIILVYLEVHVWCSLGVLFLAFGFFKTWRSVVVACLKKCFALGFYKPFLLLVGFLNVSVTKALIDAHMQEKQDLSLLL
VVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATNLSANLSQNALNSLQYITTPPASSPISTSTRESATKEKETHSPT
FKVETTQLDVKIPNFKQKKVKKDTINTKNEI

Nucleotide

• Length: 1056 bp

>NTDB_id=666305 MPG37_RS00730 WP_245051720.1 153791..154846(+) (comB6) [Helicobacter pylori strain Hpfe114]
ATGAAAAATGACGCTTATGAGATTATCCTTTCTTGGTTTATCACGCCTTTAACGGCGATTTTAGGGCGTTTCGCTGAATT
TTTTCTCTACACTTTGCATGCGCAATTGGTGTTTAATAGCGTGGTCGCTTTGGCGTTCATGCTCTTTGCTTATAAGAGTT
TGAAAGAACAGAATCTCTTCAGCACTAGCACGCTAACAGAAGCGTTATTGTTTGTGGGGTTTTTTGCACTTTTTAACTAC
GCTTTAAAAAATCCCATGCATTTTTATGAATTTTTCCAAAACGCTATTTTTATTGCACCTAACATGATTACACAAAGCCT
CTCTCAAAGCTTGAGTAACTTTTCTAACCACACGCTTTCTTTAGATTTTATCTTTAATCATGGTTTTTATGCCCTTAGTT
TTATCAGCGATTTGAGCCATAATGAAATGTCTGTGTGGCTTTTTTTAAGCATTTTGCAAGGGCTTTTTTTGAGCGTGCTG
TTTGCGATCATCATTTTAGTGTATTTAGAAGTGCATGTGTGGTGTTCTTTAGGGGTGCTGTTTTTAGCGTTTGGGTTTTT
TAAAACCTGGAGGAGCGTTGTGGTGGCGTGCCTAAAAAAATGCTTCGCTCTTGGGTTTTACAAGCCTTTTTTGTTGTTGG
TGGGCTTTTTGAACGTGTCGGTTACTAAGGCTTTAATAGATGCGCATATGCAAGAAAAACAAGACTTAAGCCTTTTATTG
GTGGTAGCGTTATTTTTGTGTTGCGTTTTTATCATAGGCGTGCCTTTTTTCATCAACGCTTTGTTTAGGGTGCAAAACAG
CCTTAAAGAAACTTACAAACTCGCCACCAATTTGAGCGCCAACCTCAGCCAAAACGCCCTTAATTCCTTACAATATATCA
CGACCCCACCCGCTTCTTCTCCTATTTCTACTTCTACAAGAGAAAGCGCCACTAAAGAAAAAGAAACGCATTCCCCCACA
TTCAAGGTAGAAACCACTCAATTAGATGTAAAAATCCCAAATTTCAAGCAAAAAAAGGTTAAAAAGGATACAATAAATAC
AAAAAATGAAATTTAA

Domains

Predicted by InterproScan.

• TrbL/VirB6 plasmid conjugal transfer protein (TrbL) (44-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB6	Helicobacter pylori 26695	95.442	100	0.954