Detailed information NTG0666228

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MPG39_RS05420
• Genome accession: NZ_CP094059
• Coordinates: 1133025..1133825 (-)
• Length: 266 a.a.
• NCBI ID: WP_245080025.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe122
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1128025..1138825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG39_RS05380 (MPG39_05380)	-	1128900..1129685 (-)	786	WP_245080014.1	hypothetical protein	-
MPG39_RS05385 (MPG39_05385)	-	1129685..1130071 (-)	387	WP_245080016.1	DUF1294 domain-containing protein	-
MPG39_RS05390 (MPG39_05390)	-	1130376..1131032 (-)	657	WP_342369694.1	lysozyme	-
MPG39_RS05395 (MPG39_05395)	-	1131061..1131621 (-)	561	WP_245080023.1	hypothetical protein	-
MPG39_RS05400 (MPG39_05400)	-	1131605..1131943 (-)	339	WP_000699911.1	hypothetical protein	-
MPG39_RS05405 (MPG39_05405)	-	1132133..1132228 (-)	96	WP_180534467.1	hypothetical protein	-
MPG39_RS05410 (MPG39_05410)	-	1132359..1132565 (-)	207	WP_245080024.1	tetratricopeptide repeat protein	-
MPG39_RS05415 (MPG39_05415)	dprB	1132624..1133028 (-)	405	WP_220958298.1	Holliday junction resolvase RuvX	Machinery gene
MPG39_RS05420 (MPG39_05420)	dprA	1133025..1133825 (-)	801	WP_245080025.1	DNA-processing protein DprA	Machinery gene
MPG39_RS05425 (MPG39_05425)	minE	1133837..1134070 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
MPG39_RS05430 (MPG39_05430)	minD	1134067..1134873 (-)	807	WP_220912539.1	septum site-determining protein MinD	-
MPG39_RS05435 (MPG39_05435)	ilvC	1134897..1135889 (-)	993	WP_245081315.1	ketol-acid reductoisomerase	-
MPG39_RS05445 (MPG39_05445)	-	1136137..1136919 (+)	783	WP_120878727.1	NAD+ synthase	-
MPG39_RS05450 (MPG39_05450)	-	1136916..1137854 (+)	939	WP_245080026.1	tetraacyldisaccharide 4'-kinase	-
MPG39_RS05455 (MPG39_05455)	pseH	1137787..1138329 (-)	543	WP_245080027.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29877.85 Da
• Isoelectric Point: 8.8842

>NTDB_id=666228 MPG39_RS05420 WP_245080025.1 1133025..1133825(-) (dprA) [Helicobacter pylori strain Hpfe122]
MKSNFQYNALEDIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=666228 MPG39_RS05420 WP_245080025.1 1133025..1133825(-) (dprA) [Helicobacter pylori strain Hpfe122]
ATGAAGAGCAATTTCCAATACAACGCACTAGAGGATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCTCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTGGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (11-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414