Detailed information NTG0666105

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG504_RS34680
• Genome accession: NZ_CP108733
• Coordinates: 7748042..7749328 (+)
• Length: 428 a.a.
• NCBI ID: WP_033285988.1
• Uniprot ID: A0ABW6MII4
• Organism: Streptomyces sp. NBC_00986
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7743042..7754328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG504_RS34645 (OG504_34630)	-	7743786..7743980 (+)	195	WP_026151384.1	hypothetical protein	-
OG504_RS34650 (OG504_34635)	-	7743992..7744225 (+)	234	WP_405993327.1	hypothetical protein	-
OG504_RS34665 (OG504_34650)	tig	7744817..7746181 (+)	1365	WP_405993328.1	trigger factor	-
OG504_RS34670 (OG504_34655)	clpP	7746549..7747151 (+)	603	WP_033285987.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG504_RS34675 (OG504_34660)	clpP	7747201..7747881 (+)	681	WP_405839990.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG504_RS34680 (OG504_34665)	clpX	7748042..7749328 (+)	1287	WP_033285988.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG504_RS34685 (OG504_34670)	-	7749422..7750426 (-)	1005	WP_405993329.1	hypothetical protein	-
OG504_RS34690 (OG504_34675)	-	7750563..7753187 (+)	2625	WP_405993330.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46841.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=666105 OG504_RS34680 WP_033285988.1 7748042..7749328(+) (clpX) [Streptomyces sp. NBC_00986]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=666105 OG504_RS34680 WP_033285988.1 7748042..7749328(+) (clpX) [Streptomyces sp. NBC_00986]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCGAAGAAGGCACTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAGAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCACAGA
CCCTGGCCCGCATGTTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAGGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCACGCGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516